RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA893346" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA893346 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9795921 9795921 PRJNA893346_P_NODE_19768_length_347_cov_0.992701_g19279_i0 PRJNA893346 19768 347 0.99270099999999994 3.44467247 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 163 1.4499999999999998e-35   NTclustered gi|290995181|ref|XM_002680150.1| 5762 g19279 i0 83.815 2.23054755043228 173 26 50 2 139 310 636 807 Naegleria gruberi 60S ribosomal protein L2 (NAEGRDRAFT_35785), mRNA blastn 774 163 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19995011 19995011 PRJNA893346_P_NODE_31896_length_259_cov_1.317204_g31406_i0 PRJNA893346 31896 259 1.317204 3.41155836 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 156 1.75e-33   NTclustered gi|2108229086|ref|XM_002678359.2| 5762 g31406 i0 82.32 5.4980694980695 181 30 69 2 79 258 52 231 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_5552), partial mRNA blastn 1424 156 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;