RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA893346" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA893346 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8520854 8520854 PRJNA893346_P_NODE_18587_length_358_cov_2.505263_g18098_i0 PRJNA893346 18587 358 2.505263 8.96884154 Spizellomyces punctatus 109760 Fungi Fungi 202 3.18e-47   NTclustered gi|1026972659|ref|XM_016751717.1| 645134 g18098 i0 77.485 79.7737430167598 342 74 95 3 16 355 174 514 Spizellomyces punctatus DAOM BR117 60S ribosomal protein L19-B (SPPG_03456), partial mRNA blastn 28559 202 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
14896393 14896393 PRJNA893346_P_NODE_35572_length_248_cov_0.880000_g35082_i0 PRJNA893346 35572 248 0.88 2.1824 Fimicolochytrium jonesii 1396493 Fungi Fungi 67.6 8.01e-7   NTclustered gi|2432083613|ref|XM_053070646.1| 1396493 g35082 i0 100 2.1008064516129 36 0 15 0 42 77 1113 1078 Fimicolochytrium jonesii uncharacterized protein (EV422DRAFT_534114), mRNA blastn 521 67.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;