contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA893346" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5971133 | 5971133 | PRJNA893346_P_NODE_15065_length_401_cov_0.939024_g14577_i0 | PRJNA893346 | 15065 | 401 | 0.939024 | 3.76548624 | Gemella sanguinis | 84135 | Bacteria | Bacteria | 54.7 | 0.011 | NTclustered | gi|1780450472|gb|CP046313.1| | 84135 | g14577 | i0 | 100 | 0.0723192019950125 | 29 | 0 | 7 | 0 | 170 | 198 | 560221 | 560249 | Gemella sanguinis strain FDAARGOS_742 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella sanguinis | ||
| 6347325 | 6347325 | PRJNA893346_P_NODE_9725_length_506_cov_1.399538_g9241_i0 | PRJNA893346 | 9725 | 506 | 1.399538 | 7.08166228 | Lactobacillus | 1578 | Bacteria | Bacteria | 62.1 | 8.22e-5 | NTclustered | gi|1785991537|gb|CP039261.1| | 33959 | g9241 | i0 | 89.796 | 1.52766798418972 | 49 | 4 | 9 | 1 | 286 | 333 | 1635908 | 1635860 | Lactobacillus johnsonii strain DC22.2 chromosome, complete genome | blastn | 773 | 62.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus johnsonii | ||
| 7246628 | 7246628 | PRJNA893346_P_NODE_39946_length_241_cov_0.916667_g39456_i0 | PRJNA893346 | 39946 | 241 | 0.916667 | 2.20916747 | Enterococcus faecium | 1352 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2890913812|gb|CP127427.1| | 1352 | g39456 | i0 | 100 | 0.348547717842324 | 28 | 0 | 12 | 0 | 29 | 56 | 16368 | 16341 | Enterococcus faecium strain ER05745.5 plasmid pER05745_5B.2, complete sequence | blastn | 84 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecium | ||
| 12722764 | 12722764 | PRJNA893346_P_NODE_34110_length_250_cov_0.870056_g33620_i0 | PRJNA893346 | 34110 | 250 | 0.870056 | 2.17514 | Staphylococcus | 1279 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g33620 | i0 | 100 | 100 | 250 | 0 | 100 | 0 | 1 | 250 | 2021575 | 2021824 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 25000 | 462 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 17820804 | 17820804 | PRJNA893346_P_NODE_3234_length_908_cov_3.742515_g2854_i0 | PRJNA893346 | 3234 | 908 | 3.742515 | 33.9820362 | root | 1 | Root_unresolved | Root_unresolved | 1677 | 0 | NTclustered | gi|1796975023|gb|CP033086.1| | 1280 | g2854 | i0 | 100 | 58.0770925110132 | 908 | 0 | 100 | 0 | 1 | 908 | 2428193 | 2427286 | Staphylococcus aureus strain WH9628 chromosome | blastn | 52734 | 1677 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 18719788 | 18719788 | PRJNA893346_P_NODE_31715_length_260_cov_1.604278_g31225_i0 | PRJNA893346 | 31715 | 260 | 1.604278 | 4.1711228 | Anaerococcus nagyae | 1755241 | Bacteria | Bacteria | 453 | 5.5600000000000005e-123 | NTclustered | gi|2722731751|dbj|AP031484.1| | 1755241 | g31225 | i0 | 100 | 327.261538461538 | 245 | 0 | 95 | 0 | 16 | 260 | 122130 | 121886 | Anaerococcus nagyae NBRC 113824 DNA, complete genome: sequence1 | blastn | 85088 | 453 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus nagyae | ||
| 19994535 | 19994535 | PRJNA893346_P_NODE_15076_length_400_cov_3.125382_g14588_i0 | PRJNA893346 | 15076 | 400 | 3.125382 | 12.501528 | Sutcliffiella horikoshii | 79883 | Bacteria | Bacteria | 63.9 | 1.77e-5 | NTclustered | gi|1198028747|gb|CP020880.1| | 79883 | g14588 | i0 | 100 | 0.085 | 34 | 0 | 9 | 0 | 80 | 113 | 3029447 | 3029414 | Sutcliffiella horikoshii strain 20a chromosome, complete genome | blastn | 34 | 63.9 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Sutcliffiella | Sutcliffiella horikoshii | ||
| 22920863 | 22920863 | PRJNA893346_P_NODE_21778_length_329_cov_2.054688_g21289_i0 | PRJNA893346 | 21778 | 329 | 2.054688 | 6.75992352 | root | 1 | Root_unresolved | Root_unresolved | 575 | 1.4899999999999995e-159 | NTclustered | gi|1796975023|gb|CP033086.1| | 1280 | g21289 | i0 | 98.765 | 29.4133738601824 | 324 | 3 | 98 | 1 | 1 | 324 | 2427005 | 2427327 | Staphylococcus aureus strain WH9628 chromosome | blastn | 9677 | 575 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 25469986 | 25469986 | PRJNA893346_P_NODE_31700_length_260_cov_1.647059_g31210_i0 | PRJNA893346 | 31700 | 260 | 1.647059 | 4.2823534 | Staphylococcus | 1279 | Bacteria | Bacteria | 481 | 2.55e-131 | NTclustered | gi|2894814215|gb|CP178526.1| | 1292 | g31210 | i0 | 100 | 23.7269230769231 | 260 | 0 | 100 | 0 | 1 | 260 | 2186446 | 2186187 | Staphylococcus warneri strain X5R13 chromosome, complete genome | blastn | 6169 | 481 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;