contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA893346" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3419060 | 3419060 | PRJNA893346_P_NODE_31943_length_259_cov_1.241935_g31453_i0 | PRJNA893346 | 31943 | 259 | 1.241935 | 3.21661165 | uncultured Acidimicrobiaceae bacterium | 410722 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|2874254072|emb|OY970155.1| | 410722 | g31453 | i0 | 100 | 0.108108108108108 | 28 | 0 | 11 | 0 | 186 | 213 | 4655162 | 4655189 | MAG: uncultured Acidimicrobiaceae bacterium isolate MFD10071.bin.2.24 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiaceae | uncultured Acidimicrobiaceae bacterium | |||
| 3419187 | 3419187 | PRJNA893346_P_NODE_37783_length_244_cov_0.900585_g37293_i0 | PRJNA893346 | 37783 | 244 | 0.900585 | 2.1974274 | Nocardioides sp. zg-1228 | 2763008 | Bacteria | Bacteria | 327 | 3.27e-85 | NTclustered | gi|1995570698|gb|CP070961.1| | 2763008 | g37293 | i0 | 90.947 | 19.4508196721311 | 243 | 22 | 99 | 0 | 1 | 243 | 3660054 | 3659812 | Nocardioides sp. zg-1228 chromosome, complete genome | blastn | 4746 | 327 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides sp. zg-1228 | ||
| 3419323 | 3419323 | PRJNA893346_P_NODE_7463_length_585_cov_1.353516_g6989_i0 | PRJNA893346 | 7463 | 585 | 1.353516 | 7.9180686 | Subtercola sp. PAMC28395 | 2846775 | Bacteria | Bacteria | 63.9 | 2.67e-5 | NTclustered | gi|2053520473|gb|CP076547.1| | 2846775 | g6989 | i0 | 93.182 | 0.0752136752136752 | 44 | 2 | 8 | 1 | 312 | 355 | 374296 | 374338 | Subtercola sp. PAMC28395 chromosome, complete genome | blastn | 44 | 63.9 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Subtercola | Subtercola sp. PAMC28395 | ||
| 5071323 | 5071323 | PRJNA893346_P_NODE_23384_length_316_cov_2.349794_g22894_i0 | PRJNA893346 | 23384 | 316 | 2.349794 | 7.42534904 | Cutibacterium | 1912216 | Bacteria | Bacteria | 339 | 2.0299999999999997e-88 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g22894 | i0 | 100 | 285.316455696203 | 183 | 0 | 100 | 0 | 134 | 316 | 56031 | 55849 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 90160 | 339 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 5971232 | 5971232 | PRJNA893346_P_NODE_18545_length_359_cov_1.076923_g18056_i0 | PRJNA893346 | 18545 | 359 | 1.076923 | 3.86615357 | Embleya sp. NBC_00888 | 2975960 | Bacteria | Bacteria | 67.6 | 1.21e-6 | NTclustered | gi|2655411662|gb|CP108785.1| | 2975960 | g18056 | i0 | 79.412 | 0.440111420612813 | 102 | 15 | 27 | 5 | 201 | 296 | 4388768 | 4388667 | Embleya sp. NBC_00888 plasmid unnamed1, complete sequence | blastn | 158 | 67.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Embleya | Embleya sp. NBC_00888 | ||
| 6347266 | 6347266 | PRJNA893346_P_NODE_13905_length_418_cov_2.188406_g13418_i0 | PRJNA893346 | 13905 | 418 | 2.188406 | 9.14753708 | Bacteria | 2 | Bacteria | Bacteria | 52.8 | 0.04 | NTclustered | gi|1387115530|gb|CP015453.1| | 139021 | g13418 | i0 | 100 | 0.267942583732057 | 28 | 0 | 7 | 0 | 188 | 215 | 3187090 | 3187063 | Dietzia psychralcaliphila strain ILA-1 chromosome, complete genome | blastn | 112 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Dietziaceae | Dietzia | Dietzia psychralcaliphila | ||
| 6347269 | 6347269 | PRJNA893346_P_NODE_14545_length_408_cov_2.194030_g14057_i0 | PRJNA893346 | 14545 | 408 | 2.19403 | 8.9516424 | Gordonia | 2053 | Bacteria | Bacteria | 660 | 0 | NTclustered | gi|2714308933|gb|CP136139.1| | 410332 | g14057 | i0 | 95.833 | 337.272058823529 | 408 | 17 | 100 | 0 | 1 | 408 | 93332 | 93739 | Gordonia malaquae strain A448 chromosome | blastn | 137607 | 660 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Gordoniaceae | Gordonia | Gordonia malaquae | ||
| 9795840 | 9795840 | PRJNA893346_P_NODE_16688_length_379_cov_2.444444_g16200_i0 | PRJNA893346 | 16688 | 379 | 2.444444 | 9.26444276 | Streptomyces sp. NBC_01190 | 2903767 | Bacteria | Bacteria | 54.7 | 0.01 | NTclustered | gi|2654779599|gb|CP108580.1| | 2903767 | g16200 | i0 | 100 | 0.0765171503957784 | 29 | 0 | 8 | 0 | 279 | 307 | 3989328 | 3989356 | Streptomyces sp. NBC_01190 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_01190 | ||
| 9796026 | 9796026 | PRJNA893346_P_NODE_23848_length_313_cov_0.962500_g23358_i0 | PRJNA893346 | 23848 | 313 | 0.9625 | 3.012625 | Rubrobacter radiotolerans | 42256 | Bacteria | Bacteria | 54.7 | 0.008 | NTclustered | gi|627776062|gb|CP007514.1| | 42256 | g23358 | i0 | 100 | 0.0926517571884984 | 29 | 0 | 9 | 0 | 165 | 193 | 598765 | 598793 | Rubrobacter radiotolerans strain RSPS-4, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Rubrobacteria | Rubrobacterales | Rubrobacteraceae | Rubrobacter | Rubrobacter radiotolerans | ||
| 11447049 | 11447049 | PRJNA893346_P_NODE_5969_length_659_cov_3.440273_g5505_i0 | PRJNA893346 | 5969 | 659 | 3.440273 | 22.67139907 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1179 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g5505 | i0 | 98.938 | 276.36722306525 | 659 | 7 | 100 | 0 | 1 | 659 | 56773 | 57431 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 182126 | 1179 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 12347188 | 12347188 | PRJNA893346_P_NODE_24970_length_304_cov_1.519481_g24480_i0 | PRJNA893346 | 24970 | 304 | 1.519481 | 4.61922224 | Streptomyces sp. NBC_00988 | 2903704 | Bacteria | Bacteria | 54.7 | 0.008 | NTclustered | gi|2655351745|gb|CP108730.1| | 2903704 | g24480 | i0 | 100 | 0.0953947368421053 | 29 | 0 | 10 | 0 | 207 | 235 | 694019 | 693991 | Streptomyces sp. NBC_00988 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_00988 | ||
| 14896218 | 14896218 | PRJNA893346_P_NODE_27552_length_287_cov_1.079439_g27062_i0 | PRJNA893346 | 27552 | 287 | 1.079439 | 3.09798993 | Agromyces sp. MMS24-JH15 | 3243765 | Bacteria | Bacteria | 152 | 2.5399999999999996e-32 | NTclustered | gi|2836090395|gb|CP171358.1| | 3243765 | g27062 | i0 | 80.095 | 0.735191637630662 | 211 | 36 | 72 | 5 | 47 | 254 | 2668820 | 2668613 | Agromyces sp. MMS24-JH15 chromosome, complete genome | blastn | 211 | 152 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Agromyces | Agromyces sp. MMS24-JH15 | ||
| 18719796 | 18719796 | PRJNA893346_P_NODE_32035_length_258_cov_1.664865_g31545_i0 | PRJNA893346 | 32035 | 258 | 1.664865 | 4.2953517 | Gordonia alkanivorans | 84096 | Bacteria | Bacteria | 418 | 2.0099999999999995e-112 | NTclustered | gi|1552508818|gb|CP027114.1| | 84096 | g31545 | i0 | 96.471 | 323.065891472868 | 255 | 6 | 98 | 2 | 5 | 258 | 3772725 | 3772977 | Gordonia alkanivorans strain YC-RL2 chromosome, complete genome | blastn | 83351 | 418 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Gordoniaceae | Gordonia | Gordonia alkanivorans | ||
| 20369590 | 20369590 | PRJNA893346_P_NODE_14736_length_405_cov_3.644578_g14248_i0 | PRJNA893346 | 14736 | 405 | 3.644578 | 14.7605409 | Cutibacterium | 1912216 | Bacteria | Bacteria | 632 | 1.0899999999999998e-176 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g14248 | i0 | 100 | 240.481481481481 | 342 | 0 | 100 | 0 | 1 | 342 | 55345 | 55686 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 97395 | 632 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 21645405 | 21645405 | PRJNA893346_P_NODE_12297_length_446_cov_4.265416_g11812_i0 | PRJNA893346 | 12297 | 446 | 4.265416 | 19.02375536 | Cutibacterium | 1912216 | Bacteria | Bacteria | 758 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g11812 | i0 | 99.758 | 270.19730941704 | 413 | 1 | 100 | 0 | 34 | 446 | 56554 | 56142 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 120508 | 758 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22545074 | 22545074 | PRJNA893346_P_NODE_27618_length_286_cov_4.474178_g27128_i0 | PRJNA893346 | 27618 | 286 | 4.474178 | 12.79614908 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 529 | 1e-145 | NTclustered | gi|2493032747|gb|CP114008.1| | 1747 | g27128 | i0 | 100 | 279.912587412587 | 286 | 0 | 100 | 0 | 1 | 286 | 626226 | 625941 | Cutibacterium acnes strain CBS-BPNBT19227 chromosome, complete genome | blastn | 80055 | 529 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22920879 | 22920879 | PRJNA893346_P_NODE_27338_length_288_cov_1.432558_g26848_i0 | PRJNA893346 | 27338 | 288 | 1.432558 | 4.12576704 | Micrococcus | 1269 | Bacteria | Bacteria | 527 | 3.63e-145 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g26848 | i0 | 99.653 | 208.270833333333 | 288 | 1 | 100 | 0 | 1 | 288 | 345887 | 345600 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 59982 | 527 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 25094372 | 25094372 | PRJNA893346_P_NODE_33440_length_251_cov_0.865169_g32950_i0 | PRJNA893346 | 33440 | 251 | 0.865169 | 2.17157419 | Streptomyces sp. cg36 | 3238798 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|2784064359|gb|CP163520.1| | 3238798 | g32950 | i0 | 100 | 0.111553784860558 | 28 | 0 | 11 | 0 | 151 | 178 | 995425 | 995398 | Streptomyces sp. cg36 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. cg36 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;