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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA891846" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 10 ✖

bioproject 1

  • PRJNA891846 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2518679 2518679 PRJNA891846_P_NODE_22282_length_323_cov_1.432000_g22063_i0 PRJNA891846 22282 323 1.432 4.62536 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 462 1.18e-125   NTclustered gi|695467811|ref|XM_009541420.1| 67593 g22063 i0 92.401 86.0061919504644 329 17 100 6 1 323 341 15 Phytophthora sojae hypothetical protein mRNA blastn 27780 462 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
4695704 4695704 PRJNA891846_P_NODE_35964_length_253_cov_1.283333_g35744_i0 PRJNA891846 35964 253 1.283333 3.24683249 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 217 7.689999999999999e-52   NTclustered gi|695381515|ref|XM_009518817.1| 67593 g35744 i0 82.47 14.3122529644269 251 40 98 3 5 253 495 247 Phytophthora sojae hypothetical protein mRNA blastn 3621 217 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
5071195 5071195 PRJNA891846_P_NODE_36324_length_251_cov_2.539326_g36104_i0 PRJNA891846 36324 251 2.539326 6.37370826 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 464 2.47e-126   NTclustered gi|14495562|gb|L21708.2|PFA34K 5821 g36104 i0 100 99.9482071713147 251 0 100 0 1 251 1232 982 Plasmodium berghei p23-like protein mRNA, partial cds blastn 25087 464 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
12346473 12346473 PRJNA891846_P_NODE_43130_length_245_cov_0.895349_g42910_i0 PRJNA891846 43130 245 0.895349 2.19360505 Thalassiosira pseudonana 35128 SAR_Eukaryotes SAR_Eukaryotes 75 4.72e-9   NTclustered gi|223993350|ref|XM_002286323.1| 296543 g42910 i0 87.5 0.261224489795918 64 8 26 0 41 104 358 421 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA blastn 64 75 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
16545685 16545685 PRJNA891846_P_NODE_40173_length_248_cov_0.880000_g39953_i0 PRJNA891846 40173 248 0.88 2.1824 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|676381124|ref|XM_009035593.1| 44056 g39953 i0 100 0.233870967741935 29 0 12 0 99 127 507 535 Aureococcus anophagefferens hypothetical protein mRNA blastn 58 54.7 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Aureococcus Aureococcus anophagefferens
17445760 17445760 PRJNA891846_P_NODE_48114_length_206_cov_5.902256_g47894_i0 PRJNA891846 48114 206 5.902256 12.15864736 Cryothecomonas sp. APCC MC5-1Cryo 741088 SAR_Eukaryotes SAR_Eukaryotes 313 7.479999999999998e-81   NTclustered gi|290760480|gb|GQ144683.1| 741088 g47894 i0 94.146 100.087378640777 205 10 99 2 3 206 1805 1602 Cryothecomonas sp. APCC MC5-1Cryo large subunit ribosomal RNA gene, partial sequence blastn 20618 313 1 Eukaryota Sar   Cercozoa Thecofilosea Cryomonadida Protaspidae Cryothecomonas Cryothecomonas sp. APCC MC5-1Cryo
18718130 18718130 PRJNA891846_P_NODE_12755_length_423_cov_1.282857_g12536_i0 PRJNA891846 12755 423 1.282857 5.42648511 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 597 4.1699999999999986e-166   NTclustered gi|146762526|gb|EF553458.1| 2850 g12536 i0 92.217 100.709219858156 424 30 100 3 1 423 4065 4486 Phaeodactylum tricornutum strain CCAP 1055/1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 42600 597 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
19094616 19094616 PRJNA891846_P_NODE_25775_length_299_cov_2.628319_g25556_i0 PRJNA891846 25775 299 2.628319 7.85867381 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.028   NTclustered gi|915136483|ref|XM_013481102.1| 5804 g25556 i0 100 0.280936454849498 28 0 9 0 217 244 3627 3654 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 84 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
21268682 21268682 PRJNA891846_P_NODE_14357_length_400_cov_1.162080_g14138_i0 PRJNA891846 14357 400 1.16208 4.64832 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 195 6.02e-45   NTclustered gi|695434857|ref|XM_009533226.1| 67593 g14138 i0 80.723 5.9475 249 48 62 0 140 388 88 336 Phytophthora sojae hypothetical protein mRNA blastn 2379 195 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
21645277 21645277 PRJNA891846_P_NODE_32977_length_266_cov_1.341969_g32758_i0 PRJNA891846 32977 266 1.341969 3.56963754 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 486 5.629999999999999e-133   NTclustered gi|505574761|gb|AY598625.2| 82937 g32758 i0 99.624 99.6691729323308 266 1 100 0 1 266 2597 2862 Pythium graminicola strain CBS 327.62 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 26512 486 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium graminicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;