RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA890871" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA890871 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9793015 9793015 PRJNA890871_P_NODE_72368_length_247_cov_0.885057_g72233_i0 PRJNA890871 72368 247 0.885057 2.18609079 Cokeromyces recurvatus 90255 Fungi Fungi 163 9.88e-36   NTclustered gi|2324083841|ref|XM_051523433.1| 90255 g72233 i0 84.663 1.35627530364372 163 25 66 0 85 247 697 535 Cokeromyces recurvatus meiotic recombinase Dmc1 (BX663DRAFT_441048), partial mRNA blastn 335 163 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
17443609 17443609 PRJNA890871_P_NODE_90774_length_230_cov_2.828025_g90639_i0 PRJNA890871 90774 230 2.828025 6.5044575 Mucor velutinosus 708070 Fungi Fungi 185 1.94e-42   NTclustered gi|2724932545|ref|XM_064824701.1| 708070 g90639 i0 90.647 0.604347826086956 139 13 60 0 8 146 161 23 Mucor velutinosus NADH:ubiquinone oxidoreductase 24 (NUO24), partial mRNA blastn 139 185 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
21644706 21644706 PRJNA890871_P_NODE_48717_length_268_cov_2.194872_g48582_i0 PRJNA890871 48717 268 2.194872 5.88225696 Mucor 4830 Fungi Fungi 496 9.429999999999999e-136   NTclustered gi|908373101|gb|JF723685.2| 4841 g48582 i0 100 100 268 0 100 0 1 268 577 844 Mucor racemosus strain CBS 115.08 18S ribosomal RNA gene, partial sequence blastn 26800 496 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
23816543 23816543 PRJNA890871_P_NODE_35939_length_290_cov_1.419355_g35804_i0 PRJNA890871 35939 290 1.419355 4.1161295 Mucor racemosus 4841 Fungi Fungi 536 6.079999999999999e-148   NTclustered gi|225134681|gb|FJ345353.1| 4841 g35804 i0 100 56.5172413793103 290 0 100 0 1 290 2239 2528 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16390 536 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;