RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA889065" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA889065 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4691761 4691761 PRJNA889065_S_NODE_25524_length_192_cov_2.161074_g25286_i0 PRJNA889065 25524 192 2.161074 4.14926208 Rhizopus delemar 936053 Fungi Fungi 100 5.82e-17   NTclustered gi|2797476040|ref|XM_067667186.1| 246409 g25286 i0 79.856 3.96354166666667 139 26 72 2 1 138 819 956 Rhizopus delemar RA 99-880 transitional endoplasmic reticulum ATPase (RO3G_12602), partial mRNA blastn 761 100 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
5966689 5966689 PRJNA889065_S_NODE_36205_length_158_cov_2.417391_g35967_i0 PRJNA889065 36205 158 2.417391 3.81947778 Halteromyces radiatus 101107 Fungi Fungi 130 5.860000000000001e-26   NTclustered gi|2323723214|ref|XM_051544668.1| 101107 g35967 i0 90 50.1708860759494 100 10 63 0 6 105 417 516 Halteromyces radiatus 40S ribosomal protein S18 (BX664DRAFT_328813), mRNA blastn 7927 130 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
12342494 12342494 PRJNA889065_S_NODE_28030_length_183_cov_1.292857_g27792_i0 PRJNA889065 28030 183 1.292857 2.36592831 Gilbertella persicaria 101096 Fungi Fungi 78.7 2.57e-10   NTclustered gi|2323721047|ref|XM_051582306.1| 101096 g27792 i0 88.06 2.46448087431694 67 6 36 2 118 183 243 178 Gilbertella persicaria ribosomal protein S28e (B0P05DRAFT_584049), partial mRNA blastn 451 78.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
14891418 14891418 PRJNA889065_S_NODE_7092_length_355_cov_2.621795_g6854_i0 PRJNA889065 7092 355 2.621795 9.30737225 Phycomyces blakesleeanus 4837 Fungi Fungi 87.9 9.21e-13   NTclustered gi|1069965094|ref|XM_018440173.1| 763407 g6854 i0 86.25 4.45070422535211 80 11 23 0 246 325 1161 1082 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 1580 87.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;