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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA889065" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA889065 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2138809 2138809 PRJNA889065_S_NODE_25562_length_192_cov_1.852349_g25324_i0 PRJNA889065 25562 192 1.852349 3.55651008 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 117 5.78e-22   NTclustered gi|2095499288|gb|MZ461463.1| 5763 g25324 i0 86.792 97.5364583333333 106 13 55 1 1 106 2292 2188 Naegleria fowleri isolate AY27 mitochondrion, complete genome blastn 18727 117 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
2517742 2517742 PRJNA889065_S_NODE_13302_length_264_cov_32.683258_g13064_i0 PRJNA889065 13302 264 32.683258 86.28380112 Paravahlkampfia 166957 Heterolobosea other_Eukaryota 411 3.4499999999999996e-110   NTclustered gi|37051004|emb|AJ550994.1| 225656 g13064 i0 95.686 83.8522727272727 255 11 97 0 1 255 1780 1526 Paravahlkampfia sp. li3_03 partial 18S rRNA gene, isolate li3_03 blastn 22137 411 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia sp. li3_03
5966711 5966711 PRJNA889065_S_NODE_5225_length_411_cov_2.853261_g4987_i0 PRJNA889065 5225 411 2.853261 11.72690271 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 152 3.78e-32   NTclustered gi|2877467367|gb|PQ835000.1| 166956 g4987 i0 92.453 10.8053527980535 106 8 26 0 94 199 16951 16846 Neovahlkampfia damariscottae strain CCAP:1588/7 mitochondrion, complete genome blastn 4441 152 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
7620206 7620206 PRJNA889065_S_NODE_15226_length_248_cov_139.619512_g14988_i0 PRJNA889065 15226 248 139.619512 346.25638976 Naegleria 5761 Heterolobosea other_Eukaryota 180 9.859999999999999e-41   NTclustered gi|2031946985|emb|OD958550.1| 5763 g14988 i0 81.14 570.745967741935 228 40 91 3 23 248 3241 3015 Naegleria fowleri Karachi_NF001 strain blastn 141545 180 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
8895066 8895066 PRJNA889065_S_NODE_227_length_1187_cov_46.493007_g183_i0 PRJNA889065 227 1187 46.493007 551.87199309 Paravahlkampfia 166957 Heterolobosea other_Eukaryota 2169 0   NTclustered gi|1121487417|gb|KX068999.1| 166958 g183 i0 99.663 53.2805391743892 1186 4 99 0 1 1186 1553 368 Paravahlkampfia ustiana strain ST-39 18S ribosomal RNA gene, partial sequence blastn 63244 2169 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana
11066932 11066932 PRJNA889065_S_NODE_409_length_1016_cov_152.658787_g339_i0 PRJNA889065 409 1016 152.658787 1551.01327592 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 141 2.14e-28   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g339 i0 87.603 12.009842519685 121 15 27 0 639 759 4131 4251 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12202 141 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
13616973 13616973 PRJNA889065_S_NODE_131_length_1370_cov_114.811605_g100_i0 PRJNA889065 131 1370 114.811605 1572.9189885 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 381 1.58e-100   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g100 i0 80.906 16.5138686131387 508 75 37 17 10 513 3390 2901 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22624 381 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
14891318 14891318 PRJNA889065_S_NODE_2112_length_579_cov_30.871269_g1905_i0 PRJNA889065 2112 579 30.871269 178.74464751 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 300 1.85e-76   NTclustered gi|2874368068|gb|PQ819792.1| 166956 g1905 i0 89.744 39.4956822107081 234 24 40 0 343 576 1050 1283 Neovahlkampfia damariscottae strain CCAP:1588/7 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 22868 300 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
16166075 16166075 PRJNA889065_S_NODE_24433_length_196_cov_5.705882_g24195_i0 PRJNA889065 24433 196 5.705882 11.18352872 Neovahlkampfia nana 1869201 Heterolobosea other_Eukaryota 305 1.18e-78   NTclustered gi|1042160994|dbj|LC126953.1| 1869201 g24195 i0 94.872 100.010204081633 195 10 99 0 2 196 711 517 Neovahlkampfia nana gene for 18S ribosomal RNA, partial sequence, isolate: III_02 blastn 19602 305 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia nana
18714681 18714681 PRJNA889065_S_NODE_15_length_2530_cov_20.055086_g9_i0 PRJNA889065 15 2530 20.055086 507.3936758 Stachyamoeba lipophora 463046 Heterolobosea other_Eukaryota 281 3.07e-70   NTclustered gi|756877602|ref|NC_026312.1| 463046 g9 i0 78.158 23.3758893280632 467 84 18 16 1378 1838 1487 1941 Stachyamoeba lipophora strain ATCC 50324 culture-collection ATCC:50324 mitochondrion, complete genome blastn 59141 281 1 Eukaryota Discoba   Heterolobosea     Gruberellidae Stachyamoeba Stachyamoeba lipophora
20368615 20368615 PRJNA889065_S_NODE_7576_length_344_cov_39.820598_g7338_i0 PRJNA889065 7576 344 39.820598 136.98285712 Paravahlkampfia 166957 Heterolobosea other_Eukaryota 636 7.059999999999998e-178   NTclustered gi|1121487417|gb|KX068999.1| 166958 g7338 i0 100 45.8895348837209 344 0 100 0 1 344 29 372 Paravahlkampfia ustiana strain ST-39 18S ribosomal RNA gene, partial sequence blastn 15786 636 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana
21265362 21265362 PRJNA889065_S_NODE_3537_length_481_cov_5.995434_g3308_i0 PRJNA889065 3537 481 5.995434 28.83803754 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 180 2.0599999999999993e-40   NTclustered gi|2874368068|gb|PQ819792.1| 166956 g3308 i0 83.254 14.3471933471933 209 22 65 7 25 228 30 230 Neovahlkampfia damariscottae strain CCAP:1588/7 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 6901 180 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
21265382 21265382 PRJNA889065_S_NODE_5877_length_388_cov_101.579710_g5639_i0 PRJNA889065 5877 388 101.57971 394.1292748 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 254 9.47e-63   NTclustered gi|2719226838|gb|PP695237.1| 51637 g5639 i0 84.47 57.7216494845361 264 34 67 7 27 286 4748 5008 Naegleria lovaniensis strain TS rDNA-containing extrachromosomal element genomic sequence blastn 22396 254 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
22540220 22540220 PRJNA889065_S_NODE_34578_length_162_cov_3.865546_g34340_i0 PRJNA889065 34578 162 3.865546 6.26218452 Paravahlkampfia sp. A1PW2 932695 Heterolobosea other_Eukaryota 300 4.36e-77   NTclustered gi|313665838|gb|GU230754.1| 932695 g34340 i0 100 101.5 162 0 100 0 1 162 1755 1916 Paravahlkampfia sp. A1PW2 18S ribosomal RNA gene, complete sequence blastn 16443 300 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia sp. A1PW2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;