contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA889065" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4691792 | 4691792 | PRJNA889065_S_NODE_30844_length_173_cov_1.961538_g30606_i0 | PRJNA889065 | 30844 | 173 | 1.961538 | 3.39346074 | Brachybacterium faecium | 43669 | Bacteria | Bacteria | 274 | 2.85e-69 | NTclustered | gi|256558041|gb|CP001643.1| | 446465 | g30606 | i0 | 95.858 | 3.71098265895954 | 169 | 7 | 98 | 0 | 4 | 172 | 133705 | 133537 | Brachybacterium faecium DSM 4810 strain 6-10, complete genome | blastn | 642 | 274 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermabacteraceae | Brachybacterium | Brachybacterium faecium | ||
| 9791295 | 9791295 | PRJNA889065_S_NODE_27048_length_186_cov_2.573427_g26810_i0 | PRJNA889065 | 27048 | 186 | 2.573427 | 4.78657422 | Micrococcus yunnanensis | 566027 | Bacteria | Bacteria | 344 | 2.34e-90 | NTclustered | gi|2506638323|gb|CP125290.1| | 566027 | g26810 | i0 | 100 | 199.236559139785 | 186 | 0 | 100 | 0 | 1 | 186 | 248032 | 247847 | Micrococcus yunnanensis strain TJPT4 chromosome, complete genome | blastn | 37058 | 344 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus yunnanensis | ||
| 10170714 | 10170714 | PRJNA889065_S_NODE_12108_length_276_cov_4.068670_g11870_i0 | PRJNA889065 | 12108 | 276 | 4.06867 | 11.2295292 | Cutibacterium | 1912216 | Bacteria | Bacteria | 505 | 1.62e-138 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g11870 | i0 | 99.638 | 271.463768115942 | 276 | 1 | 100 | 0 | 1 | 276 | 57819 | 58094 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 74924 | 505 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11066809 | 11066809 | PRJNA889065_S_NODE_12689_length_270_cov_2.814978_g12451_i0 | PRJNA889065 | 12689 | 270 | 2.814978 | 7.6004406 | Corynebacterium afermentans | 38286 | Bacteria | Bacteria | 475 | 1.2399999999999999e-129 | NTclustered | gi|2531253808|gb|CP046530.1| | 144184 | g12451 | i0 | 100 | 433.462962962963 | 257 | 0 | 95 | 0 | 14 | 270 | 640207 | 640463 | Corynebacterium afermentans subsp. lipophilum strain DSM 44282 chromosome, complete genome | blastn | 117035 | 475 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium afermentans | ||
| 12721703 | 12721703 | PRJNA889065_S_NODE_29910_length_176_cov_2.075188_g29672_i0 | PRJNA889065 | 29910 | 176 | 2.075188 | 3.65233088 | Dietzia | 37914 | Bacteria | Bacteria | 281 | 1.74e-71 | NTclustered | gi|2708443468|gb|CP143297.1| | 322509 | g29672 | i0 | 95.455 | 335.159090909091 | 176 | 8 | 100 | 0 | 1 | 176 | 716471 | 716296 | Dietzia kunjamensis strain IITR165 chromosome, complete genome | blastn | 58988 | 281 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Dietziaceae | Dietzia | Dietzia kunjamensis | ||
| 13996082 | 13996082 | PRJNA889065_S_NODE_20511_length_215_cov_1.575581_g20273_i0 | PRJNA889065 | 20511 | 215 | 1.575581 | 3.38749915 | Cutibacterium | 1912216 | Bacteria | Bacteria | 398 | 2.1099999999999997e-106 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g20273 | i0 | 100 | 259.544186046512 | 215 | 0 | 100 | 0 | 1 | 215 | 55817 | 55603 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 55802 | 398 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 17819731 | 17819731 | PRJNA889065_S_NODE_21434_length_210_cov_2.449102_g21196_i0 | PRJNA889065 | 21434 | 210 | 2.449102 | 5.1431142 | Corynebacterium | 1716 | Bacteria | Bacteria | 388 | 1.24e-103 | NTclustered | gi|2547417233|gb|CP073096.1| | 38304 | g21196 | i0 | 100 | 367.37619047619 | 210 | 0 | 100 | 0 | 1 | 210 | 790013 | 789804 | Corynebacterium tuberculostearicum strain CTNIH20 chromosome, complete genome | blastn | 77149 | 388 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum | ||
| 19093696 | 19093696 | PRJNA889065_S_NODE_30295_length_175_cov_1.393939_g30057_i0 | PRJNA889065 | 30295 | 175 | 1.393939 | 2.43939325 | Cutibacterium | 1912216 | Bacteria | Bacteria | 324 | 2.83e-84 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g30057 | i0 | 100 | 299.291428571429 | 175 | 0 | 100 | 0 | 1 | 175 | 55823 | 55997 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 52376 | 324 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 24193756 | 24193756 | PRJNA889065_S_NODE_36659_length_157_cov_2.008772_g36421_i0 | PRJNA889065 | 36659 | 157 | 2.008772 | 3.15377204 | Streptosporangium | 2000 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2651931882|gb|CP109068.1| | 106412 | g36421 | i0 | 100 | 2.88535031847134 | 29 | 0 | 18 | 0 | 22 | 50 | 8175848 | 8175820 | Streptosporangium subroseum strain NBC 01811 chromosome, complete genome | blastn | 453 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Streptosporangiaceae | Streptosporangium | Streptosporangium subroseum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;