RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA888821" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA888821 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4691023 4691023 PRJNA888821_P_NODE_17944_length_310_cov_4.455696_g17862_i0 PRJNA888821 17944 310 4.455696 13.8126576 Anisofilariata chironomi 745834 Fungi Fungi 185 2.7399999999999998e-42   NTclustered gi|291603819|gb|GU126383.1| 745834 g17862 i0 89.189 27.6483870967742 148 16 48 0 3 150 1193 1046 Anisofilariata chironomi isolate CP-NWR-1 small subunit ribosomal RNA gene, partial sequence blastn 8571 185 1 Eukaryota Opisthokonta Fungi Microsporidia       Anisofilariata Anisofilariata chironomi
13616185 13616185 PRJNA888821_P_NODE_1451_length_488_cov_202.604819_g1376_i0 PRJNA888821 1451 488 202.604819 988.71151672 Nematocida parisii 586133 Fungi Fungi 241 9.46e-59   NTclustered gi|906375813|ref|XR_001214622.1| 881290 g1376 i0 85 19.7254098360656 240 33 70 2 1 238 2218 1980 Nematocida parisii ERTm1 28S ribosomal RNA (NEPG_02678), partial rRNA blastn 9626 241 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida parisii
13616895 13616895 PRJNA888821_P_NODE_5531_length_320_cov_2.874494_g5449_i0 PRJNA888821 5531 320 2.874494 9.1983808 Nematocida major 1912982 Fungi Fungi 292 1.6199999999999999e-74   NTclustered gi|2234805738|ref|XM_047916023.1| 1912982 g5449 i0 84.828 1.221875 290 44 91 0 31 320 302 13 Nematocida major histone H4 (NEMAJ01_2185), partial mRNA blastn 391 292 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida major
22540044 22540044 PRJNA888821_P_NODE_58_length_1634_cov_315.743113_g45_i0 PRJNA888821 58 1634 315.743113 5159.24246642 Nematocida homosporus 1912981 Fungi Fungi 1718 0   NTclustered gi|1111589182|gb|KX360153.1| 1912981 g45 i0 91.116 37.390452876377 1272 108 78 5 279 1547 1 1270 Nematocida homosporus isolate NICm516 small subunit ribosomal RNA gene, partial sequence blastn 61096 1718 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida homosporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;