RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA888821" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA888821 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7241256 7241256 PRJNA888821_P_NODE_49206_length_208_cov_6.170370_g49123_i0 PRJNA888821 49206 208 6.17037 12.8343696 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 183 6.19e-42   NTclustered gi|1402550473|gb|MH488759.1| 2231160 g49123 i0 83.575 12.1298076923077 207 23 96 8 1 200 32 234 Rosculus sp. isolate CSA small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 2523 183 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
14890999 14890999 PRJNA888821_P_NODE_42032_length_231_cov_14.367089_g41949_i0 PRJNA888821 42032 231 14.367089 33.18797559 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 69.4 2.05e-7   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g41949 i0 81.395 13.6796536796537 86 14 37 2 1 85 2304 2388 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 3160 69.4 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;