contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA888821" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3414038 | 3414038 | PRJNA888821_P_NODE_83_length_1482_cov_36.599006_g61_i0 | PRJNA888821 | 83 | 1482 | 36.599006 | 542.39726892 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 1181 | 0 | NTclustered | gi|2556916994|gb|CP129486.1| | 3034175 | g61 | i0 | 84.306 | 166.566126855601 | 1217 | 182 | 98 | 9 | 11 | 1224 | 468414 | 469624 | MAG: Bdellovibrionota bacterium isolate cMAG.10 chromosome, complete genome | blastn | 246851 | 1181 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 4691053 | 4691053 | PRJNA888821_P_NODE_19704_length_310_cov_2.776371_g19622_i0 | PRJNA888821 | 19704 | 310 | 2.776371 | 8.6067501 | Bdellovibrio sp. HCB290 | 3394356 | Bacteria | Bacteria | 233 | 9.64e-57 | NTclustered | gi|2895991164|gb|CP178620.1| | 3394356 | g19622 | i0 | 94.667 | 28.9290322580645 | 150 | 8 | 48 | 0 | 1 | 150 | 774029 | 774178 | Bdellovibrio sp. HCB290 chromosome, complete genome | blastn | 8968 | 233 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB290 | ||
| 7241057 | 7241057 | PRJNA888821_P_NODE_38206_length_243_cov_8.870588_g38123_i0 | PRJNA888821 | 38206 | 243 | 8.870588 | 21.55552884 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 261 | 3.34e-65 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g38123 | i0 | 86.122 | 2.58847736625514 | 245 | 30 | 99 | 4 | 1 | 242 | 2185968 | 2185725 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 629 | 261 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 8895021 | 8895021 | PRJNA888821_P_NODE_8807_length_310_cov_12.860759_g8725_i0 | PRJNA888821 | 8807 | 310 | 12.860759 | 39.8683529 | Bacteriovorax | 146784 | Bacteria | Bacteria | 206 | 2.1e-48 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g8725 | i0 | 93.525 | 1.38387096774194 | 139 | 8 | 45 | 1 | 5 | 142 | 672789 | 672927 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 429 | 206 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 9791198 | 9791198 | PRJNA888821_P_NODE_888_length_566_cov_5.438134_g816_i0 | PRJNA888821 | 888 | 566 | 5.438134 | 30.77983844 | Bacteriovorax sp. HI3 | 2984118 | Bacteria | Bacteria | 231 | 6.6799999999999995e-56 | NTclustered | gi|2321225508|dbj|AP026946.1| | 2984118 | g816 | i0 | 83.951 | 1.7773851590106 | 243 | 37 | 69 | 2 | 163 | 404 | 656126 | 656367 | Bacteriovorax sp. HI3 DNA, complete genome | blastn | 1006 | 231 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. HI3 | ||
| 10170663 | 10170663 | PRJNA888821_P_NODE_53368_length_196_cov_18.983740_g53285_i0 | PRJNA888821 | 53368 | 196 | 18.98374 | 37.2081304 | Bdellovibrio | 958 | Bacteria | Bacteria | 189 | 1.24e-43 | NTclustered | gi|2800914199|gb|CP168971.1| | 959 | g53285 | i0 | 95.763 | 33.2397959183673 | 118 | 4 | 60 | 1 | 76 | 193 | 3234382 | 3234498 | Bdellovibrio bacteriovorus strain Bd16 chromosome, complete genome | blastn | 6515 | 189 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 12342177 | 12342177 | PRJNA888821_P_NODE_43050_length_228_cov_6.845161_g42967_i0 | PRJNA888821 | 43050 | 228 | 6.845161 | 15.60696708 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 150 | 7.01e-32 | NTclustered | gi|578016248|gb|CP002190.1| | 765869 | g42967 | i0 | 80.729 | 0.842105263157895 | 192 | 37 | 84 | 0 | 33 | 224 | 1470573 | 1470382 | Bdellovibrio bacteriovorus W, complete genome | blastn | 192 | 150 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 15269622 | 15269622 | PRJNA888821_P_NODE_20732_length_309_cov_11.076271_g20650_i0 | PRJNA888821 | 20732 | 309 | 11.076271 | 34.22567739 | Bdellovibrio | 958 | Bacteria | Bacteria | 226 | 1.6099999999999998e-54 | NTclustered | gi|2216477995|gb|CP093442.1| | 2835041 | g20650 | i0 | 93.96 | 22.6925566343042 | 149 | 9 | 48 | 0 | 161 | 309 | 2444491 | 2444343 | Bdellovibrio reynosensis strain LBG001 chromosome, complete genome | blastn | 7012 | 226 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio reynosensis | ||
| 16165494 | 16165494 | PRJNA888821_P_NODE_27153_length_282_cov_10.555024_g27071_i0 | PRJNA888821 | 27153 | 282 | 10.555024 | 29.76516768 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 488 | 1.6699999999999998e-133 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g27071 | i0 | 97.872 | 6.50709219858156 | 282 | 6 | 100 | 0 | 1 | 282 | 2388531 | 2388250 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 1835 | 488 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 19093537 | 19093537 | PRJNA888821_P_NODE_49115_length_208_cov_8.518519_g49032_i0 | PRJNA888821 | 49115 | 208 | 8.518519 | 17.71851952 | Bdellovibrio | 958 | Bacteria | Bacteria | 374 | 3.4199999999999996e-99 | NTclustered | gi|2328635023|gb|CP106855.1| | 1732569 | g49032 | i0 | 99.038 | 201.495192307692 | 208 | 2 | 100 | 0 | 1 | 208 | 2944899 | 2944692 | Bdellovibrio sp. SKB1291214 chromosome, complete genome | blastn | 41911 | 374 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. SKB1291214 | ||
| 19989681 | 19989681 | PRJNA888821_P_NODE_44056_length_224_cov_19.218543_g43973_i0 | PRJNA888821 | 44056 | 224 | 19.218543 | 43.04953632 | Bdellovibrio sp. BIS2 | 3395379 | Bacteria | Bacteria | 392 | 1.0299999999999999e-104 | NTclustered | gi|2884284196|dbj|AP035879.1| | 3395379 | g43973 | i0 | 98.222 | 3.38839285714286 | 225 | 3 | 100 | 1 | 1 | 224 | 1674857 | 1675081 | Bdellovibrio sp. BIS2 DNA, complete genome | blastn | 759 | 392 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. BIS2 | ||
| 21644031 | 21644031 | PRJNA888821_P_NODE_34077_length_253_cov_5.016667_g33994_i0 | PRJNA888821 | 34077 | 253 | 5.016667 | 12.69216751 | Bdellovibrio | 958 | Bacteria | Bacteria | 159 | 1.31e-34 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g33994 | i0 | 79.386 | 2.70355731225296 | 228 | 45 | 90 | 2 | 13 | 239 | 753172 | 753398 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 684 | 159 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 22540085 | 22540085 | PRJNA888821_P_NODE_9598_length_310_cov_11.632911_g9516_i0 | PRJNA888821 | 9598 | 310 | 11.632911 | 36.0620241 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 424 | 5.3299999999999996e-114 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g9516 | i0 | 91.586 | 87.5903225806452 | 309 | 18 | 99 | 1 | 1 | 309 | 3447315 | 3447015 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 27153 | 424 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 22919715 | 22919715 | PRJNA888821_P_NODE_6558_length_311_cov_5.831933_g6476_i0 | PRJNA888821 | 6558 | 311 | 5.831933 | 18.13731163 | Bdellovibrio | 958 | Bacteria | Bacteria | 145 | 4.66e-30 | NTclustered | gi|2800917394|gb|CP168972.1| | 959 | g6476 | i0 | 88.333 | 0.87459807073955 | 120 | 14 | 39 | 0 | 192 | 311 | 2256946 | 2257065 | Bdellovibrio bacteriovorus strain Bd19 chromosome, complete genome | blastn | 272 | 145 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 24193251 | 24193251 | PRJNA888821_P_NODE_2099_length_434_cov_72.598338_g2024_i0 | PRJNA888821 | 2099 | 434 | 72.598338 | 315.07678692 | Bdellovibrio | 958 | Bacteria | Bacteria | 752 | 0 | NTclustered | gi|2313021230|gb|CP102930.1| | 959 | g2024 | i0 | 97.926 | 126.760368663594 | 434 | 9 | 100 | 0 | 1 | 434 | 2388059 | 2388492 | Bdellovibrio bacteriovorus strain kdesi chromosome, complete genome | blastn | 55014 | 752 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 24193257 | 24193257 | PRJNA888821_P_NODE_21339_length_309_cov_7.415254_g21257_i0 | PRJNA888821 | 21339 | 309 | 7.415254 | 22.91313486 | Bdellovibrio | 958 | Bacteria | Bacteria | 167 | 9.88e-37 | NTclustered | gi|2801803968|gb|CP169237.1| | 959 | g21257 | i0 | 86.667 | 4.84142394822006 | 150 | 20 | 49 | 0 | 1 | 150 | 1371013 | 1370864 | Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome | blastn | 1496 | 167 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;