contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA888821" and tax_clade = "Amoebozoa"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2517207 | 2517207 | PRJNA888821_P_NODE_15002_length_310_cov_6.544304_g14920_i0 | PRJNA888821 | 15002 | 310 | 6.544304 | 20.2873424 | Paramoeba | 200890 | Discosea | other_Eukaryota | 73.1 | 2.22e-8 | NTclustered | gi|1079488025|ref|NC_031417.1| | 180228 | g14920 | i0 | 97.619 | 1.65161290322581 | 42 | 1 | 14 | 0 | 10 | 51 | 42743 | 42784 | Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome | blastn | 512 | 73.1 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Dactylopodida | Paramoebidae | Paramoeba | Paramoeba pemaquidensis | ||
| 5966034 | 5966034 | PRJNA888821_P_NODE_27625_length_280_cov_9.314010_g27543_i0 | PRJNA888821 | 27625 | 280 | 9.31401 | 26.079228 | Cochliopodium larifeili | 1017091 | Discosea | other_Eukaryota | 414 | 2.86e-111 | NTclustered | gi|330902856|gb|JF298254.1| | 1017091 | g27543 | i0 | 93.571 | 31.3071428571429 | 280 | 15 | 100 | 3 | 1 | 280 | 1393 | 1669 | Cochliopodium larifeili clone 902 18S ribosomal RNA gene, partial sequence | blastn | 8766 | 414 | 1 | Eukaryota | Amoebozoa | Discosea | Himatismenida | Cochliopodiidae | Cochliopodium | Cochliopodium larifeili | |||
| 8515782 | 8515782 | PRJNA888821_P_NODE_34687_length_251_cov_1.719101_g34604_i0 | PRJNA888821 | 34687 | 251 | 1.719101 | 4.31494351 | Ripella sp. GP2 | 1217115 | Discosea | other_Eukaryota | 370 | 5.53e-98 | NTclustered | gi|399764204|gb|JQ271715.1| | 1217115 | g34604 | i0 | 98.122 | 86.804780876494 | 213 | 3 | 85 | 1 | 1 | 213 | 11 | 222 | Ripella sp. GP2 18S ribosomal RNA gene, partial sequence | blastn | 21788 | 370 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Ripella | Ripella sp. GP2 | |||
| 16165985 | 16165985 | PRJNA888821_P_NODE_8573_length_310_cov_13.333333_g8491_i0 | PRJNA888821 | 8573 | 310 | 13.333333 | 41.3333323 | Acanthamoeba castellanii | 5755 | Discosea | other_Eukaryota | 161 | 4.6099999999999995e-35 | NTclustered | gi|562028|gb|U12386.1|ACU12386 | 5755 | g8491 | i0 | 86 | 1.45161290322581 | 150 | 21 | 48 | 0 | 161 | 310 | 33215 | 33364 | Acanthamoeba castellanii mitochondrion, complete genome | blastn | 450 | 161 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 22539942 | 22539942 | PRJNA888821_P_NODE_48178_length_211_cov_5.463768_g48095_i0 | PRJNA888821 | 48178 | 211 | 5.463768 | 11.52855048 | Physarum polycephalum | 5791 | Evosea | other_Eukaryota | 148 | 2.3e-31 | NTclustered | gi|3225|emb|V01160.1| | 5791 | g48095 | i0 | 80 | 6.01421800947867 | 220 | 29 | 99 | 14 | 1 | 210 | 18 | 232 | Introns 1 and 2 of Physarum gene for 26S ribosomal RNA, together with flanking exon regions | blastn | 1269 | 148 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Physariida | Physaraceae | Physarum | Physarum polycephalum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;