RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA888104" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA888104 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4690677 4690677 PRJNA888104_P_NODE_20964_length_232_cov_0.895706_g20895_i0 PRJNA888104 20964 232 0.895706 2.07803792 Magnusiomyces paraingens 2606893 Fungi Fungi 52.8 0.021   NTclustered gi|1800254221|ref|XM_031998169.1| 2606893 g20895 i0 100 0.120689655172414 28 0 12 0 203 230 1229 1256 Magnusiomyces paraingens uncharacterized protein (SAPINGB_P003451), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales Dipodascaceae Magnusiomyces Magnusiomyces paraingens
9790232 9790232 PRJNA888104_P_NODE_21548_length_231_cov_0.901235_g21479_i0 PRJNA888104 21548 231 0.901235 2.08185285 Cladosporium halotolerans 1052096 Fungi Fungi 289 1.45e-73   NTclustered gi|2837732678|ref|XM_069370813.1| 1052096 g21479 i0 89.177 1 231 25 100 0 1 231 1164 934 Cladosporium halotolerans uncharacterized protein (WHR41_02207), partial mRNA blastn 231 289 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
15269493 15269493 PRJNA888104_P_NODE_6932_length_371_cov_1.559603_g6863_i0 PRJNA888104 6932 371 1.559603 5.78612713 Paradevriesia 2881007 Fungi Fungi 658 0   NTclustered gi|313483002|gb|HQ433007.1| 175243 g6863 i0 98.652 99.5363881401617 371 5 100 0 1 371 327 697 Uncultured Ascomycota clone asc07052 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 36928 658 1 Eukaryota Opisthokonta Fungi Ascomycota         uncultured Ascomycota
18713789 18713789 PRJNA888104_P_NODE_6575_length_380_cov_1.717042_g6506_i0 PRJNA888104 6575 380 1.717042 6.5247596 Aspergillus campestris 41068 Fungi Fungi 52.8 0.036   NTclustered gi|1383817080|ref|XM_024836301.1| 1392248 g6506 i0 100 0.0736842105263158 28 0 7 0 73 100 2805 2778 Aspergillus campestris IBT 28561 VID27-domain-containing protein (P168DRAFT_286214), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus campestris
21643722 21643722 PRJNA888104_P_NODE_6077_length_394_cov_2.486154_g6008_i0 PRJNA888104 6077 394 2.486154 9.79544676 Opisthokonta 33154 Fungi Fungi 728 0   NTclustered gi|325484983|gb|HQ407432.1| 5061 g6008 i0 100 99.6725888324873 394 0 100 0 1 394 739 346 Aspergillus niger strain B1.Eg mitochondrial citrate synthase precursor, gene, partial cds; nuclear gene for mitochondrial product blastn 39271 728 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
22539082 22539082 PRJNA888104_P_NODE_21998_length_230_cov_0.906832_g21929_i0 PRJNA888104 21998 230 0.906832 2.0857136 Alternaria rosae 1187941 Fungi Fungi 409 1.0600000000000001e-109   NTclustered gi|2185422105|ref|XM_046175471.1| 1187941 g21929 i0 98.696 14.2347826086957 230 3 100 0 1 230 1049 1278 Alternaria rosae uncharacterized protein (BKA58DRAFT_53228), mRNA blastn 3274 409 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria rosae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;