RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA885753" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA885753 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11065286 11065286 PRJNA885753_S_NODE_3929_length_249_cov_1.255682_g3911_i0 PRJNA885753 3929 249 1.255682 3.12664818 Eriocheir sinensis kita-like virus 3022112 Viruses Viruses 448 2.46e-121   NTclustered gi|2430285606|gb|OP019101.1| 3022112 g3911 i0 99.197 1 249 1 100 1 1 249 12874 12627 MAG: Eriocheir sinensis kita-like virus isolate Suqian, Jiangsu genomic sequence blastn 249 448 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Kitaviridae   Eriocheir sinensis kita-like virus
19988366 19988366 PRJNA885753_S_NODE_3556_length_254_cov_7.430939_g3538_i0 PRJNA885753 3556 254 7.430939 18.87458506 Orthoavulavirus javaense 3051375 Viruses Viruses 62.1 3.83e-5   NTclustered gi|1810954291|gb|MN727300.2| 2560319 g3538 i0 100 0.12992125984252 33 0 13 0 1 33 15285 15253 Avian paramyxovirus 1 isolate chicken/Indonesia/ITA/012WJ, complete genome blastn 33 62.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthoavulavirus Orthoavulavirus javaense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;