RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA885753" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA885753 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3793277 3793277 PRJNA885753_S_NODE_2783_length_279_cov_2.242718_g2765_i0 PRJNA885753 2783 279 2.242718 6.25718322 root 1 Root_unresolved Root_unresolved 335 2.2799999999999993e-87   NTclustered gi|1377596870|gb|MF044052.1| 10515 g2765 i0 100 92.6917562724014 181 0 92 0 18 198 33920 34100 human adenovirus 2 isolate HK91, complete genome blastn 25861 335 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
8894218 8894218 PRJNA885753_S_NODE_4227_length_246_cov_0.901734_g4209_i0 PRJNA885753 4227 246 0.901734 2.21826564 root 1 Root_unresolved Root_unresolved 455 1.4500000000000002e-123   NTclustered gi|2452971982|gb|OQ518311.1| 10533 g4209 i0 100 100.073170731707 246 0 100 0 1 246 34296 34541 Human adenovirus 1 isolate HAdV-C1/USA/2C6/2009, complete genome blastn 24618 455 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
22918946 22918946 PRJNA885753_S_NODE_2338_length_300_cov_1.030837_g2320_i0 PRJNA885753 2338 300 1.030837 3.092511 root 1 Root_unresolved Root_unresolved 555 1.7399999999999995e-153   NTclustered gi|1377596870|gb|MF044052.1| 10515 g2320 i0 100 100 300 0 100 0 1 300 33184 32885 human adenovirus 2 isolate HK91, complete genome blastn 30000 555 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;