contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA885753" and tax_kingdom = "Bacillati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5965012 | 5965012 | PRJNA885753_S_NODE_2305_length_301_cov_2.508772_g2287_i0 | PRJNA885753 | 2305 | 301 | 2.508772 | 7.55140372 | Corynebacterium comes | 2675218 | Bacteria | Bacteria | 551 | 2.2699999999999992e-152 | NTclustered | gi|1782155183|gb|CP046453.1| | 2675218 | g2287 | i0 | 99.668 | 441.12292358804 | 301 | 1 | 100 | 0 | 1 | 301 | 701989 | 702289 | Corynebacterium comes strain 2019 chromosome, complete genome | blastn | 132778 | 551 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium comes | ||
| 8514600 | 8514600 | PRJNA885753_S_NODE_1527_length_353_cov_1.657143_g1509_i0 | PRJNA885753 | 1527 | 353 | 1.657143 | 5.84971479 | Corynebacterium humireducens | 1223514 | Bacteria | Bacteria | 597 | 3.42e-166 | NTclustered | gi|748228406|gb|CP005286.1| | 1223515 | g1509 | i0 | 97.167 | 401.640226628895 | 353 | 10 | 100 | 0 | 1 | 353 | 626527 | 626879 | Corynebacterium humireducens NBRC 106098 = DSM 45392, complete genome | blastn | 141779 | 597 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium humireducens | ||
| 8514652 | 8514652 | PRJNA885753_S_NODE_867_length_450_cov_3.053050_g849_i0 | PRJNA885753 | 867 | 450 | 3.05305 | 13.738725 | Priestia megaterium | 1404 | Bacteria | Bacteria | 52.8 | 0.044 | NTclustered | gi|1830450554|gb|CP051128.1| | 1404 | g849 | i0 | 100 | 0.0622222222222222 | 28 | 0 | 6 | 0 | 377 | 404 | 2883836 | 2883809 | Priestia megaterium strain S2 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Priestia | Priestia megaterium | ||
| 10169934 | 10169934 | PRJNA885753_S_NODE_1668_length_341_cov_1.518657_g1650_i0 | PRJNA885753 | 1668 | 341 | 1.518657 | 5.17862037 | Mycobacteriaceae | 1762 | Bacteria | Bacteria | 599 | 9.18e-167 | NTclustered | gi|2118065613|gb|CP084713.1| | 319706 | g1650 | i0 | 100 | 157.067448680352 | 324 | 0 | 95 | 0 | 1 | 324 | 1313057 | 1313380 | Mycolicibacterium phocaicum strain RL-HY01 chromosome, complete genome | blastn | 53560 | 599 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium phocaicum | ||
| 10169938 | 10169938 | PRJNA885753_S_NODE_3688_length_252_cov_0.871508_g3670_i0 | PRJNA885753 | 3688 | 252 | 0.871508 | 2.19620016 | Listeria | 1637 | Bacteria | Bacteria | 438 | 1.5e-118 | NTclustered | gi|2207579355|gb|CP084086.1| | 1642 | g3670 | i0 | 98.016 | 99.9960317460317 | 252 | 5 | 100 | 0 | 1 | 252 | 2150161 | 2150412 | Listeria innocua strain ZM39 chromosome | blastn | 25199 | 438 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria innocua | ||
| 13615350 | 13615350 | PRJNA885753_S_NODE_3931_length_249_cov_1.170455_g3913_i0 | PRJNA885753 | 3931 | 249 | 1.170455 | 2.91443295 | Tessaracoccus timonensis | 2161816 | Bacteria | Bacteria | 414 | 2.49e-111 | NTclustered | gi|1379009977|emb|LT996886.1| | 2161816 | g3913 | i0 | 97.917 | 190.144578313253 | 240 | 4 | 96 | 1 | 1 | 240 | 1995234 | 1994996 | Tessaracoccus sp. Marseille-P5995 genome assembly, chromosome: contig00001 | blastn | 47346 | 414 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Tessaracoccus | Tessaracoccus timonensis | ||
| 13995211 | 13995211 | PRJNA885753_S_NODE_1011_length_420_cov_1.974063_g993_i0 | PRJNA885753 | 1011 | 420 | 1.974063 | 8.2910646 | Mycobacteriaceae | 1762 | Bacteria | Bacteria | 776 | 0 | NTclustered | gi|2118065613|gb|CP084713.1| | 319706 | g993 | i0 | 100 | 190.278571428571 | 420 | 0 | 100 | 0 | 1 | 420 | 1313064 | 1312645 | Mycolicibacterium phocaicum strain RL-HY01 chromosome, complete genome | blastn | 79917 | 776 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium phocaicum | ||
| 16164458 | 16164458 | PRJNA885753_S_NODE_3053_length_269_cov_2.020408_g3035_i0 | PRJNA885753 | 3053 | 269 | 2.020408 | 5.43489752 | Corynebacterium humireducens | 1223514 | Bacteria | Bacteria | 401 | 2.1199999999999993e-107 | NTclustered | gi|748228406|gb|CP005286.1| | 1223515 | g3035 | i0 | 93.704 | 330.230483271375 | 270 | 14 | 100 | 3 | 1 | 269 | 1274788 | 1275055 | Corynebacterium humireducens NBRC 106098 = DSM 45392, complete genome | blastn | 88832 | 401 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium humireducens | ||
| 16543888 | 16543888 | PRJNA885753_S_NODE_4033_length_248_cov_0.891429_g4015_i0 | PRJNA885753 | 4033 | 248 | 0.891429 | 2.21074392 | Chroococcidiopsidales | 1890505 | Bacteria | Bacteria | 315 | 2.59e-81 | NTclustered | gi|225696214|gb|FJ805881.1| | 259957 | g4015 | i0 | 89.683 | 174.245967741935 | 252 | 18 | 100 | 5 | 1 | 248 | 1859 | 2106 | Uncultured Chroococcidiopsis sp. clone A3_5 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 43213 | 315 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 17439921 | 17439921 | PRJNA885753_S_NODE_4214_length_246_cov_0.901734_g4196_i0 | PRJNA885753 | 4214 | 246 | 0.901734 | 2.21826564 | Capillimicrobium parvum | 2884022 | Bacteria | Bacteria | 398 | 2.4799999999999997e-106 | NTclustered | gi|2164499877|gb|CP087164.1| | 2884022 | g4196 | i0 | 95.951 | 100.772357723577 | 247 | 6 | 100 | 4 | 1 | 246 | 2764372 | 2764129 | Capillimicrobium parvum strain 0166_1 chromosome, complete genome | blastn | 24790 | 398 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Capillimicrobiaceae | Capillimicrobium | Capillimicrobium parvum | ||
| 18713087 | 18713087 | PRJNA885753_S_NODE_1475_length_358_cov_1.905263_g1457_i0 | PRJNA885753 | 1475 | 358 | 1.905263 | 6.82084154 | Corynebacterium sp. SCR221107 | 3017361 | Bacteria | Bacteria | 651 | 0 | NTclustered | gi|2428482000|gb|CP115670.1| | 3017361 | g1457 | i0 | 99.441 | 390.18156424581 | 358 | 2 | 100 | 0 | 1 | 358 | 81648 | 81291 | Corynebacterium sp. SCR221107 chromosome, complete genome | blastn | 139685 | 651 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. SCR221107 | ||
| 18713133 | 18713133 | PRJNA885753_S_NODE_4235_length_246_cov_0.895954_g4217_i0 | PRJNA885753 | 4235 | 246 | 0.895954 | 2.20404684 | Clostridium baratii | 1561 | Bacteria | Bacteria | 340 | 4.2299999999999996e-89 | NTclustered | gi|2695223087|gb|CP124306.1| | 1561 | g4217 | i0 | 91.803 | 202.752032520325 | 244 | 20 | 99 | 0 | 1 | 244 | 3164749 | 3164506 | Clostridium baratii strain C201 chromosome, complete genome | blastn | 49877 | 340 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium baratii | ||
| 19092810 | 19092810 | PRJNA885753_S_NODE_515_length_585_cov_4.412109_g499_i0 | PRJNA885753 | 515 | 585 | 4.412109 | 25.81083765 | root | 1 | Root_unresolved | Root_unresolved | 809 | 0 | NTclustered | gi|119433766|gb|EF032505.1| | 2017 | g499 | i0 | 100 | 69.4410256410256 | 438 | 0 | 75 | 0 | 85 | 522 | 69444 | 69007 | Streptoalloteichus hindustanus strain ATCC 31158 tallysomycin biosynthetic gene cluster, complete sequence | blastn | 40623 | 813 | 0.995079950799508 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Streptoalloteichus | Streptoalloteichus hindustanus | ||
| 21263686 | 21263686 | PRJNA885753_S_NODE_2297_length_302_cov_0.903930_g2279_i0 | PRJNA885753 | 2297 | 302 | 0.90393 | 2.7298686 | Corynebacterium sp. SCR221107 | 3017361 | Bacteria | Bacteria | 553 | 6.32e-153 | NTclustered | gi|2428482000|gb|CP115670.1| | 3017361 | g2279 | i0 | 99.669 | 386.890728476821 | 302 | 1 | 100 | 0 | 1 | 302 | 886042 | 885741 | Corynebacterium sp. SCR221107 chromosome, complete genome | blastn | 116841 | 553 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. SCR221107 | ||
| 21263703 | 21263703 | PRJNA885753_S_NODE_3717_length_252_cov_0.871508_g3699_i0 | PRJNA885753 | 3717 | 252 | 0.871508 | 2.19620016 | Listeria innocua | 1642 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|2027970313|gb|CP071179.1| | 1642 | g3699 | i0 | 100 | 100 | 252 | 0 | 100 | 0 | 1 | 252 | 2246755 | 2246504 | Listeria innocua strain LI47 chromosome, complete genome | blastn | 25200 | 466 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria innocua | ||
| 21643533 | 21643533 | PRJNA885753_S_NODE_3097_length_268_cov_0.769231_g3079_i0 | PRJNA885753 | 3097 | 268 | 0.769231 | 2.06153908 | Oscillatoriales | 1150 | Bacteria | Bacteria | 420 | 5.84e-113 | NTclustered | gi|46409899|gb|AY584524.1| | 272133 | g3079 | i0 | 96.813 | 127.992537313433 | 251 | 8 | 94 | 0 | 4 | 254 | 523 | 773 | Microcoleus sp. PCC 8701 23S ribosomal RNA gene, partial sequence | blastn | 34302 | 420 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Microcoleus | Microcoleus sp. PCC 8701 | |
| 23813918 | 23813918 | PRJNA885753_S_NODE_2679_length_284_cov_1.644550_g2661_i0 | PRJNA885753 | 2679 | 284 | 1.64455 | 4.670522 | Mycolicibacterium aubagnense | 319707 | Bacteria | Bacteria | 520 | 5.98e-143 | NTclustered | gi|1806292234|dbj|AP022577.1| | 319707 | g2661 | i0 | 100 | 161.62676056338 | 281 | 0 | 99 | 0 | 4 | 284 | 947176 | 946896 | Mycolicibacterium aubagnense JCM 15296 DNA, complete genome | blastn | 45902 | 520 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium aubagnense | ||
| 24192874 | 24192874 | PRJNA885753_S_NODE_3379_length_260_cov_0.791444_g3361_i0 | PRJNA885753 | 3379 | 260 | 0.791444 | 2.0577544 | Micrococcales | 85006 | Bacteria | Bacteria | 331 | 2.72e-86 | NTclustered | gi|2442350572|gb|CP110680.1| | 1708 | g3361 | i0 | 89.961 | 279.269230769231 | 259 | 23 | 99 | 3 | 1 | 259 | 3280406 | 3280661 | Cellulomonas fimi strain Clb-11 chromosome, complete genome | blastn | 72610 | 331 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Cellulomonadaceae | Cellulomonas | Cellulomonas fimi |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;