RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA884104" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA884104 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2137081 2137081 PRJNA884104_S_NODE_85542_length_241_cov_1.160714_g84799_i0 PRJNA884104 85542 241 1.160714 2.79732074 Kickxella alabastrina 61397 Fungi Fungi 169 2.0599999999999997e-37   NTclustered gi|2324008468|ref|XM_051535227.1| 61397 g84799 i0 80.172 16.0954356846473 232 40 95 4 11 239 703 475 Kickxella alabastrina coatomer WD associated region-domain-containing protein (BX661DRAFT_179562), mRNA blastn 3879 169 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
17438997 17438997 PRJNA884104_S_NODE_44814_length_311_cov_1.294118_g44071_i0 PRJNA884104 44814 311 1.294118 4.02470698 Linderina pennispora 61395 Fungi Fungi 52.8 0.029   NTclustered gi|2028324226|ref|XM_040891673.1| 61395 g44071 i0 100 0.180064308681672 28 0 18 0 137 164 2675 2702 Linderina pennispora uncharacterized protein (DL89DRAFT_44690), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
22918819 22918819 PRJNA884104_S_NODE_37018_length_338_cov_6.698113_g36275_i0 PRJNA884104 37018 338 6.698113 22.63962194 Fungi 4751 Fungi Fungi 111 5.19e-20   NTclustered gi|2324002808|ref|XM_051532647.1| 61397 g36275 i0 81.119 1.35798816568047 143 23 42 3 176 316 141 1 Kickxella alabastrina ribosomal L29e protein family-domain-containing protein (BX661DRAFT_135011), partial mRNA blastn 459 111 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;