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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA884104" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA884104 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1241251 1241251 PRJNA884104_S_NODE_62001_length_265_cov_1.270833_g61258_i0 PRJNA884104 62001 265 1.270833 3.36770745 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.002   NTclustered gi|2707391811|ref|XM_064100819.1| 7653 g61258 i0 100 1.29433962264151 30 0 11 0 173 202 595 624 PREDICTED: Lytechinus pictus protein AATF-like (LOC129263858), mRNA blastn 343 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
3793127 3793127 PRJNA884104_S_NODE_25103_length_404_cov_5.377644_g24360_i0 PRJNA884104 25103 404 5.377644 21.72568176 Metazoa 33208 Echinodermata other_Eukaryota 93.5 2.28e-14   NTclustered gi|2037969038|ref|XM_041596501.1| 7654 g24360 i0 82.301 22.5074257425743 113 14 27 6 295 404 413 304 PREDICTED: Lytechinus variegatus late histone H2A.2.2-like (LOC121405574), mRNA blastn 9093 93.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
12720813 12720813 PRJNA884104_S_NODE_62570_length_264_cov_1.120419_g61827_i0 PRJNA884104 62570 264 1.120419 2.95790616 Metazoa 33208 Echinodermata other_Eukaryota 52.8 0.024   NTclustered gi|1752408402|ref|XM_030976113.1| 7668 g61827 i0 100 0.742424242424242 28 0 11 0 137 164 1265 1292 PREDICTED: Strongylocentrotus purpuratus coiled-coil domain-containing protein 1-like (LOC115920388), mRNA blastn 196 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
17439450 17439450 PRJNA884104_S_NODE_67394_length_253_cov_1.283333_g66651_i0 PRJNA884104 67394 253 1.283333 3.24683249 Diadema antillarum 105358 Echinodermata other_Eukaryota 108 4.83e-19   NTclustered gi|2919554602|ref|XM_071623363.1| 105358 g66651 i0 76.303 1.62055335968379 211 44 82 6 2 209 2401 2194 PREDICTED: Diadema antillarum cilia- and flagella-associated protein 58-like (LOC139711485), mRNA blastn 410 108 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
22918868 22918868 PRJNA884104_S_NODE_61638_length_266_cov_1.196891_g60895_i0 PRJNA884104 61638 266 1.196891 3.18373006 Opisthokonta 33154 Echinodermata other_Eukaryota 63.9 1.12e-5   NTclustered gi|1752352533|ref|XM_003725608.3| 7668 g60895 i0 97.297 2.90601503759398 37 1 14 0 73 109 2771 2807 PREDICTED: Strongylocentrotus purpuratus remodeling and spacing factor 1 (LOC578189), mRNA blastn 773 63.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;