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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA884104" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA884104 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
860306 860306 PRJNA884104_S_NODE_17041_length_487_cov_17.719807_g16302_i0 PRJNA884104 17041 487 17.719807 86.29546009 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 894 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g16302 i0 99.795 96.7145790554415 487 1 100 0 1 487 1668 2154 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 47100 894 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
1241250 1241250 PRJNA884104_S_NODE_61381_length_266_cov_2.025907_g60638_i0 PRJNA884104 61381 266 2.025907 5.38891262 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 224 4.87e-54   NTclustered gi|33346926|gb|AY251792.1| 227086 g60638 i0 83.197 86.8195488721804 244 41 92 0 1 244 479 236 Bigelowiella natans ubiquitin/actin fusion protein 1 gene, partial cds blastn 23094 224 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
2135895 2135895 PRJNA884104_S_NODE_28462_length_381_cov_3.912338_g27719_i0 PRJNA884104 28462 381 3.912338 14.90600778 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 440 6.639999999999999e-119   NTclustered gi|238617666|gb|FJ973412.1| 188950 g27719 i0 99.18 36.5564304461942 244 2 64 0 1 244 244 1 Bodomorpha minima strain ATCC 50339 alpha-tubulin (atub) gene, partial cds blastn 13928 440 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
2516783 2516783 PRJNA884104_S_NODE_26942_length_391_cov_6.298742_g26199_i0 PRJNA884104 26942 391 6.298742 24.62808122 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 717 0   NTclustered gi|33309639|gb|AF411276.1| 188950 g26199 i0 99.744 100.498721227621 391 1 100 0 1 391 1015 625 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 39295 717 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
5964108 5964108 PRJNA884104_S_NODE_45545_length_309_cov_0.978814_g44802_i0 PRJNA884104 45545 309 0.978814 3.02453526 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 196 1.26e-45   NTclustered gi|319412263|gb|HQ840955.1| 227086 g44802 i0 86.096 77.2459546925566 187 20 60 5 72 255 13886 14069 Bigelowiella natans culture-collection CCMP:621 mitochondrion, partial genome blastn 23869 196 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
5964746 5964746 PRJNA884104_S_NODE_7705_length_729_cov_2.596037_g7031_i0 PRJNA884104 7705 729 2.596037 18.92510973 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 913 0   NTclustered gi|238617630|gb|FJ973394.1| 188950 g7031 i0 98.273 79.4938271604938 521 9 71 0 209 729 837 317 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 57951 913 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
5964952 5964952 PRJNA884104_S_NODE_87965_length_225_cov_6.585526_g87222_i0 PRJNA884104 87965 225 6.585526 14.8174335 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 416 6.159999999999998e-112   NTclustered gi|33309639|gb|AF411276.1| 188950 g87222 i0 100 82.8 225 0 100 0 1 225 1468 1692 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 18630 416 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
11064460 11064460 PRJNA884104_S_NODE_49369_length_297_cov_14.325893_g48626_i0 PRJNA884104 49369 297 14.325893 42.54790221 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 549 8.029999999999997e-152   NTclustered gi|238617602|gb|FJ973377.1| 188950 g48626 i0 100 42.0673400673401 297 0 100 0 1 297 2113 2409 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 12494 549 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
12340433 12340433 PRJNA884104_S_NODE_6890_length_772_cov_4.549356_g6250_i0 PRJNA884104 6890 772 4.549356 35.12102832 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 401 6.669999999999999e-107   NTclustered gi|300676720|gb|GQ377713.1| 323453 g6250 i0 83.447 67.6774611398964 441 63 56 10 141 576 5 440 Heteromita sp. PRA-74 gcr5-like mRNA, partial sequence blastn 52247 401 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
16164310 16164310 PRJNA884104_S_NODE_8333_length_702_cov_11.359300_g7643_i0 PRJNA884104 8333 702 11.3593 79.742285999999993 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1291 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7643 i0 99.858 51.7236467236467 702 1 100 0 1 702 1044 343 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 36310 1291 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
19987074 19987074 PRJNA884104_S_NODE_2176_length_1343_cov_3.781890_g1871_i0 PRJNA884104 2176 1343 3.78189 50.7907827 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1611 0   NTclustered gi|302026154|gb|GQ377660.1| 188950 g1871 i0 99.659 70.7505584512286 881 3 66 0 1 881 13 893 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 95018 1611 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
21262146 21262146 PRJNA884104_S_NODE_11977_length_583_cov_2.974510_g11251_i0 PRJNA884104 11977 583 2.97451 17.3413933 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1066 0   NTclustered gi|300676732|gb|GQ377662.1| 188950 g11251 i0 99.657 95.0308747855918 583 2 100 0 1 583 257 839 Bodomorpha minima alpha-tubulin (Atub) gene, partial cds blastn 55403 1066 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
22538441 22538441 PRJNA884104_S_NODE_86858_length_240_cov_14.323353_g86115_i0 PRJNA884104 86858 240 14.323353 34.3760472 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 444 3.05e-120   NTclustered gi|238617602|gb|FJ973377.1| 188950 g86115 i0 100 99.1291666666667 240 0 100 0 1 240 2921 2682 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 23791 444 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
23812595 23812595 PRJNA884104_S_NODE_20699_length_443_cov_24.210811_g19956_i0 PRJNA884104 20699 443 24.210811 107.25389273 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 340 8.17e-89   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g19956 i0 83.166 51.4785553047404 398 42 89 17 49 443 4039 3664 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 22805 340 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;