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contig_metadata

67 rows where analysis = "blastn", bioproject = "PRJNA884104" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 67 ✖

bioproject 1

  • PRJNA884104 · 67 ✖

analysis 1

  • blastn · 67 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
860767 860767 PRJNA884104_S_NODE_40561_length_325_cov_1.436508_g39818_i0 PRJNA884104 40561 325 1.436508 4.668651 Trichovirus mali 12175 Viruses Viruses 505 1.95e-138   NTclustered gi|373940186|gb|JN634760.1| 12175 g39818 i0 94.753 17.4 324 17 99 0 1 324 3923 4246 Apple chlorotic leaf spot virus isolate Z1, complete genome blastn 5655 505 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
2135649 2135649 PRJNA884104_S_NODE_1582_length_1558_cov_2.152862_g1345_i0 PRJNA884104 1582 1558 2.152862 33.54158996 Trichovirus mali 12175 Viruses Viruses 2617 0   NTclustered gi|2426332688|gb|ON024143.1| 12175 g1345 i0 96.983 94.1688061617458 1558 47 100 0 1 1558 5985 7542 Apple chlorotic leaf spot virus isolate NODE-11 coat protein (CP) gene, complete cds blastn 146715 2617 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
2135738 2135738 PRJNA884104_S_NODE_20702_length_443_cov_11.745946_g19959_i0 PRJNA884104 20702 443 11.745946 52.03454078 Betacoronavirus pandemicum 3418604 Viruses Viruses 78.7 7.07e-10   NTclustered gi|2165835560|emb|OV196626.1| 2697049 g19959 i0 100 10.1444695259594 42 0 9 0 3 44 182 223 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4494 78.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
2136070 2136070 PRJNA884104_S_NODE_35802_length_344_cov_0.948339_g35059_i0 PRJNA884104 35802 344 0.948339 3.26228616 Peach virus T 1958978 Viruses Viruses 407 6.03e-109   NTclustered gi|1180718232|gb|KY348615.1| 1958978 g35059 i0 88.047 1.99418604651163 343 41 99 0 1 343 5184 5526 Peach virus T isolate JH polyprotein and putative movement protein genes, complete cds blastn 686 407 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Peach virus T
2137095 2137095 PRJNA884104_S_NODE_862_length_1983_cov_4.163351_g724_i0 PRJNA884104 862 1983 4.163351 82.55925033 Fabavirus persicae 3052201 Viruses Viruses 3415 0   NTclustered gi|1722559434|gb|MK460243.1| 2038685 g724 i0 98.404 4.92233988905698 1942 31 98 0 42 1983 6203 4262 Peach leaf pitting-associated virus isolate BC segment RNA1, complete sequence blastn 9761 3415 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Fabavirus Fabavirus persicae
2137123 2137123 PRJNA884104_S_NODE_8762_length_684_cov_1.913257_g8065_i0 PRJNA884104 8762 684 1.913257 13.08667788 Prunus persica marafivirus 3120871 Viruses Viruses 318 6.09e-82   NTclustered gi|2675378649|gb|PP317290.1| 3120871 g8065 i0 80.615 0.618421052631579 423 72 61 7 262 679 3546 3963 MAG: Prunus persica marafivirus isolate NBPGR-Shimla-1 genomic sequence blastn 423 318 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Marafivirus Prunus persica marafivirus
4688962 4688962 PRJNA884104_S_NODE_33044_length_356_cov_5.593640_g32301_i0 PRJNA884104 33044 356 5.59364 19.9133584 Betacoronavirus pandemicum 3418604 Viruses Viruses 75 7.19e-9   NTclustered gi|2557648311|emb|OY677105.1| 2697049 g32301 i0 100 12.314606741573 40 0 11 0 15 54 9678 9639 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4384 75 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
4689198 4689198 PRJNA884104_S_NODE_43584_length_315_cov_1.231405_g42841_i0 PRJNA884104 43584 315 1.231405 3.87892575 Betacoronavirus pandemicum 3418604 Viruses Viruses 56.5 0.002   NTclustered gi|2560516847|emb|OY702104.1| 2697049 g42841 i0 100 4.34603174603175 30 0 10 0 1 30 23311 23282 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 1369 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
4689558 4689558 PRJNA884104_S_NODE_61004_length_267_cov_1.592784_g60261_i0 PRJNA884104 61004 267 1.592784 4.25273328 Trichovirus mali 12175 Viruses Viruses 455 1.5900000000000002e-123   NTclustered gi|2426332694|gb|ON024146.1| 12175 g60261 i0 97.378 22.625468164794 267 7 100 0 1 267 4412 4678 Apple chlorotic leaf spot virus isolate NODE-14 coat protein (CP) gene, complete cds blastn 6041 455 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
5963472 5963472 PRJNA884104_S_NODE_125_length_3848_cov_8.947815_g117_i0 PRJNA884104 125 3848 8.947815 344.3119212 Fabavirus persicae 3052201 Viruses Viruses 6708 0   NTclustered gi|1722559436|gb|MK460244.1| 2038685 g117 i0 98.253 3.57692307692308 3835 64 99 1 1 3835 7 3838 Peach leaf pitting-associated virus isolate BC segment RNA2, complete sequence blastn 13764 6708 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Fabavirus Fabavirus persicae
5964004 5964004 PRJNA884104_S_NODE_40665_length_325_cov_1.007937_g39922_i0 PRJNA884104 40665 325 1.007937 3.27579525 Betacoronavirus pandemicum 3418604 Viruses Viruses 84.2 1.08e-11   NTclustered gi|2155043487|emb|OV016108.1| 2697049 g39922 i0 94.444 18.2153846153846 54 3 17 0 272 325 29941 29888 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 5920 84.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5964815 5964815 PRJNA884104_S_NODE_80465_length_244_cov_1.046784_g79722_i0 PRJNA884104 80465 244 1.046784 2.55415296 Betacoronavirus pandemicum 3418604 Viruses Viruses 73.1 1.69e-8   NTclustered gi|2165834592|emb|OV196099.1| 2697049 g79722 i0 89.831 19.8360655737705 59 3 24 3 187 244 122 66 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4840 73.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
6345155 6345155 PRJNA884104_S_NODE_10945_length_610_cov_1.977654_g10225_i0 PRJNA884104 10945 610 1.977654 12.0636894 Marafivirus 12051 Viruses Viruses 730 0   NTclustered gi|2701263236|gb|PP475428.1| 1955730 g10225 i0 88.322 4.99016393442623 608 71 99 0 3 610 4242 3635 Peach virus D isolate IARI replicase polyprotein gene, partial cds blastn 3044 734 0.994550408719346 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Marafivirus Marafivirus pruni
6345187 6345187 PRJNA884104_S_NODE_24885_length_406_cov_2.333333_g24142_i0 PRJNA884104 24885 406 2.333333 9.47333198 Viruses 10239 Viruses Viruses 71.3 1.08e-7   NTclustered gi|2565365187|emb|OY637518.1| 2697049 g24142 i0 100 10.6034482758621 38 0 9 0 369 406 11636 11673 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4305 71.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
7238536 7238536 PRJNA884104_S_NODE_22486_length_426_cov_1.592068_g21743_i0 PRJNA884104 22486 426 1.592068 6.78220968 Fabavirus persicae 3052201 Viruses Viruses 676 0   NTclustered gi|1722559434|gb|MK460243.1| 2038685 g21743 i0 95.305 2.98591549295775 426 20 100 0 1 426 1856 1431 Peach leaf pitting-associated virus isolate BC segment RNA1, complete sequence blastn 1272 676 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Fabavirus Fabavirus persicae
7239152 7239152 PRJNA884104_S_NODE_52926_length_288_cov_0.809302_g52183_i0 PRJNA884104 52926 288 0.809302 2.33078976 Peach virus T 1958978 Viruses Viruses 202 2.5e-47   NTclustered gi|1180718229|gb|KY348614.1| 1958978 g52183 i0 79.655 2.85416666666667 290 51 99 7 1 286 2238 2523 Peach virus T isolate BC polyprotein and putative movement protein genes, complete cds blastn 822 202 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Peach virus T
7239753 7239753 PRJNA884104_S_NODE_85586_length_241_cov_1.047619_g84843_i0 PRJNA884104 85586 241 1.047619 2.52476179 Betacoronavirus pandemicum 3418604 Viruses Viruses 78.7 3.58e-10   NTclustered gi|2165834600|emb|OV196107.1| 2697049 g84843 i0 92.727 22.7053941908714 55 2 23 2 187 241 120 68 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 5472 78.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8513701 8513701 PRJNA884104_S_NODE_44207_length_313_cov_1.254167_g43464_i0 PRJNA884104 44207 313 1.254167 3.92554271 Trichovirus mali 12175 Viruses Viruses 556 5.09e-154   NTclustered gi|373940186|gb|JN634760.1| 12175 g43464 i0 98.722 21.9456869009585 313 4 100 0 1 313 5950 6262 Apple chlorotic leaf spot virus isolate Z1, complete genome blastn 6869 556 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
8513993 8513993 PRJNA884104_S_NODE_59587_length_271_cov_1.141414_g58844_i0 PRJNA884104 59587 271 1.141414 3.09323194 Betacoronavirus pandemicum 3418604 Viruses Viruses 71.3 6.86e-8   NTclustered gi|2557646044|emb|OY675404.1| 2697049 g58844 i0 97.561 15.4354243542435 41 1 15 0 1 41 18479 18439 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4183 71.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8514127 8514127 PRJNA884104_S_NODE_65927_length_256_cov_1.398907_g65184_i0 PRJNA884104 65927 256 1.398907 3.58120192 Betacoronavirus pandemicum 3418604 Viruses Viruses 75 4.97e-9   NTclustered gi|2165835560|emb|OV196626.1| 2697049 g65184 i0 100 16.41015625 40 0 16 0 215 254 221 182 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4201 75 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8894129 8894129 PRJNA884104_S_NODE_54807_length_283_cov_0.923810_g54064_i0 PRJNA884104 54807 283 0.92381 2.6143823 Betacoronavirus 694002 Viruses Viruses 71.3 7.21e-8   NTclustered gi|2557654415|emb|OY684664.1| 2697049 g54064 i0 100 15.1060070671378 38 0 13 0 244 281 21930 21967 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4275 71.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9788477 9788477 PRJNA884104_S_NODE_3008_length_1156_cov_1.450600_g2614_i0 PRJNA884104 3008 1156 1.4506 16.768936 Trichovirus mali 12175 Viruses Viruses 1919 0   NTclustered gi|1214575054|gb|KY310577.1| 12175 g2614 i0 96.783 99.5043252595156 1150 37 99 0 1 1150 5963 4814 Trichovirus mali isolate JH, complete genome blastn 115027 1919 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
9788564 9788564 PRJNA884104_S_NODE_34628_length_349_cov_1.047101_g33885_i0 PRJNA884104 34628 349 1.047101 3.65438249 Betacoronavirus pandemicum 3418604 Viruses Viruses 91.6 6.98e-14   NTclustered gi|2165835030|emb|OV196298.1| 2697049 g33885 i0 93.548 20.4068767908309 62 2 18 2 288 349 364 305 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7122 91.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9788599 9788599 PRJNA884104_S_NODE_36368_length_341_cov_1.798507_g35625_i0 PRJNA884104 36368 341 1.798507 6.13290887 Trichovirus mali 12175 Viruses Viruses 527 4.3899999999999996e-145   NTclustered gi|374279248|gb|JN848982.1| 12175 g35625 i0 94.94 30.9648093841642 336 17 99 0 1 336 336 1 Apple chlorotic leaf spot virus isolate HB3 coat protein gene, complete cds blastn 10559 527 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
9788895 9788895 PRJNA884104_S_NODE_52028_length_290_cov_1.308756_g51285_i0 PRJNA884104 52028 290 1.308756 3.7953924 Betacoronavirus pandemicum 3418604 Viruses Viruses 52.8 0.027   NTclustered gi|2557643774|emb|OY673254.1| 2697049 g51285 i0 100 1.35172413793103 28 0 10 0 1 28 21755 21728 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 392 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9789014 9789014 PRJNA884104_S_NODE_58048_length_274_cov_4.522388_g57305_i0 PRJNA884104 58048 274 4.522388 12.39134312 Betacoronavirus pandemicum 3418604 Viruses Viruses 75 5.37e-9   NTclustered gi|2565364711|emb|OY636767.1| 2697049 g57305 i0 92.453 16.5912408759124 53 2 19 1 222 274 23332 23382 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4546 75 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
11064328 11064328 PRJNA884104_S_NODE_42689_length_318_cov_1.000000_g41946_i0 PRJNA884104 42689 318 1 3.18 Trichovirus mali 12175 Viruses Viruses 510 4.09e-140   NTclustered gi|373940186|gb|JN634760.1| 12175 g41946 i0 95.597 17.0283018867925 318 14 100 0 1 318 4879 4562 Apple chlorotic leaf spot virus isolate Z1, complete genome blastn 5415 510 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
11064579 11064579 PRJNA884104_S_NODE_55369_length_281_cov_1.471154_g54626_i0 PRJNA884104 55369 281 1.471154 4.13394274 Peach virus T 1958978 Viruses Viruses 348 2.95e-91   NTclustered gi|1180718232|gb|KY348615.1| 1958978 g54626 i0 89.007 2.93950177935943 282 29 100 2 1 281 1094 814 Peach virus T isolate JH polyprotein and putative movement protein genes, complete cds blastn 826 348 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Peach virus T
11064877 11064877 PRJNA884104_S_NODE_69689_length_251_cov_0.865169_g68946_i0 PRJNA884104 69689 251 0.865169 2.17157419 Marafivirus pruni 3052333 Viruses Viruses 318 2.03e-82   NTclustered gi|1150147038|ref|NC_033828.1| 1955730 g68946 i0 89.641 3 251 25 100 1 1 251 1354 1105 Peach virus D isolate SK, complete genome blastn 753 318 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Marafivirus Marafivirus pruni
11445036 11445036 PRJNA884104_S_NODE_38389_length_333_cov_1.303846_g37646_i0 PRJNA884104 38389 333 1.303846 4.34180718 root 1 Root_unresolved Root_unresolved 71.3 8.66e-8   NTclustered gi|2565365187|emb|OY637518.1| 2697049 g37646 i0 100 13.1741741741742 38 0 11 0 10 47 11673 11636 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4387 71.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12340228 12340228 PRJNA884104_S_NODE_58670_length_273_cov_1.260000_g57927_i0 PRJNA884104 58670 273 1.26 3.4398 Emesvirus zinderi 329852 Viruses Viruses 73.1 1.92e-8   NTclustered gi|2494998033|dbj|LC710218.1| 12022 g57927 i0 100 16.1465201465201 39 0 14 0 1 39 3592 3554 Escherichia phage MS2 GI_B RNA, complete genome blastn 4408 73.1 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae Emesvirus Emesvirus zinderi
12340643 12340643 PRJNA884104_S_NODE_79990_length_244_cov_60.707602_g79247_i0 PRJNA884104 79990 244 60.707602 148.12654888 Betacoronavirus pandemicum 3418604 Viruses Viruses 108 4.63e-19   NTclustered gi|2165835560|emb|OV196626.1| 2697049 g79247 i0 95.588 31.7745901639344 68 1 28 2 177 244 221 156 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7753 108 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13614196 13614196 PRJNA884104_S_NODE_33691_length_353_cov_1.689286_g32948_i0 PRJNA884104 33691 353 1.689286 5.96317958 Betacoronavirus pandemicum 3418604 Viruses Viruses 76.8 1.98e-9   NTclustered gi|2557417788|emb|OY655439.1| 2697049 g32948 i0 94.118 12.8328611898017 51 1 14 2 1 51 22137 22089 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4530 76.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13614283 13614283 PRJNA884104_S_NODE_38131_length_334_cov_1.409962_g37388_i0 PRJNA884104 38131 334 1.409962 4.70927308 Betacoronavirus pandemicum 3418604 Viruses Viruses 76.8 1.87e-9   NTclustered gi|2557419728|emb|OY658535.1| 2697049 g37388 i0 97.778 11.5119760479042 45 0 13 1 1 44 4754 4710 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3845 76.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13614579 13614579 PRJNA884104_S_NODE_51791_length_291_cov_1.013761_g51048_i0 PRJNA884104 51791 291 1.013761 2.95004451 Betacoronavirus pandemicum 3418604 Viruses Viruses 76.8 1.6e-9   NTclustered gi|2165834194|emb|OV195900.1| 2697049 g51048 i0 94.118 15.0962199312715 51 1 18 1 1 51 30040 29992 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4393 76.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13614583 13614583 PRJNA884104_S_NODE_51931_length_290_cov_1.649770_g51188_i0 PRJNA884104 51931 290 1.64977 4.784333 Betacoronavirus pandemicum 3418604 Viruses Viruses 56.5 0.002   NTclustered gi|2557654279|emb|OY684629.1| 2697049 g51188 i0 96.97 6.42413793103448 33 1 11 0 258 290 26114 26146 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 1863 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13614718 13614718 PRJNA884104_S_NODE_59311_length_271_cov_2.111111_g58568_i0 PRJNA884104 59311 271 2.111111 5.72111081 Betacoronavirus pandemicum 3418604 Viruses Viruses 73.1 1.91e-8   NTclustered gi|2557650385|emb|OY679204.1| 2697049 g58568 i0 93.878 16.5756457564576 49 1 17 1 225 271 21721 21769 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4492 73.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13614907 13614907 PRJNA884104_S_NODE_6851_length_774_cov_8.823110_g6213_i0 PRJNA884104 6851 774 8.82311 68.2908714 Betacoronavirus pandemicum 3418604 Viruses Viruses 76.8 4.6e-9   NTclustered gi|2165835560|emb|OV196626.1| 2697049 g6213 i0 95.833 5.67441860465116 48 0 6 2 1 48 177 222 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4392 76.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13615122 13615122 PRJNA884104_S_NODE_80091_length_244_cov_1.865497_g79348_i0 PRJNA884104 80091 244 1.865497 4.55181268 Betacoronavirus pandemicum 3418604 Viruses Viruses 78.7 3.63e-10   NTclustered gi|2560517737|emb|OY702837.1| 2697049 g79348 i0 92.727 19.8934426229508 55 2 23 1 190 244 22455 22507 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4854 78.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13615263 13615263 PRJNA884104_S_NODE_87011_length_238_cov_18.345455_g86268_i0 PRJNA884104 87011 238 18.345455 43.6621829 Betacoronavirus pandemicum 3418604 Viruses Viruses 60.2 1.28e-4   NTclustered gi|2165835560|emb|OV196626.1| 2697049 g86268 i0 100 14.1974789915966 32 0 13 0 207 238 30014 30045 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3379 60.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13615273 13615273 PRJNA884104_S_NODE_88511_length_206_cov_13.759398_g87768_i0 PRJNA884104 88511 206 13.759398 28.34435988 Betacoronavirus pandemicum 3418604 Viruses Viruses 75 3.84e-9   NTclustered gi|2165835560|emb|OV196626.1| 2697049 g87768 i0 94 21.1359223300971 50 1 24 1 1 50 174 221 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4354 75 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
14889346 14889346 PRJNA884104_S_NODE_71912_length_249_cov_0.926136_g71169_i0 PRJNA884104 71912 249 0.926136 2.30607864 Betacoronavirus pandemicum 3418604 Viruses Viruses 108 4.74e-19   NTclustered gi|2165835560|emb|OV196626.1| 2697049 g71169 i0 95.588 31.5582329317269 68 1 29 2 182 249 221 156 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7858 108 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
14889651 14889651 PRJNA884104_S_NODE_932_length_1929_cov_2.665948_g781_i0 PRJNA884104 932 1929 2.665948 51.42613692 Fabavirus persicae 3052201 Viruses Viruses 3365 0   NTclustered gi|1722559434|gb|MK460243.1| 2038685 g781 i0 98.233 5.08449974079834 1924 34 99 0 6 1929 4356 2433 Peach leaf pitting-associated virus isolate BC segment RNA1, complete sequence blastn 9808 3365 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Fabavirus Fabavirus persicae
15269266 15269266 PRJNA884104_S_NODE_87652_length_229_cov_5.602564_g86909_i0 PRJNA884104 87652 229 5.602564 12.82987156 Viruses 10239 Viruses Viruses 73.1 1.57e-8   NTclustered gi|2557641183|emb|OY671812.1| 2697049 g86909 i0 97.674 18.7379912663755 43 0 18 1 5 46 16459 16417 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4291 73.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
16163023 16163023 PRJNA884104_S_NODE_18313_length_471_cov_1.110553_g17572_i0 PRJNA884104 18313 471 1.110553 5.23070463 Betacoronavirus pandemicum 3418604 Viruses Viruses 84.2 1.62e-11   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g17572 i0 93.22 12.0615711252654 59 0 12 4 1 58 105 160 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 5681 84.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
16543858 16543858 PRJNA884104_S_NODE_75073_length_247_cov_1.500000_g74330_i0 PRJNA884104 75073 247 1.5 3.705 Betacoronavirus 694002 Viruses Viruses 69.4 2.22e-7   NTclustered gi|2557652486|emb|OY682391.1| 2697049 g74330 i0 100 17.1781376518219 37 0 15 0 210 246 11244 11280 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4243 69.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
17438634 17438634 PRJNA884104_S_NODE_26714_length_393_cov_1.759375_g25971_i0 PRJNA884104 26714 393 1.759375 6.91434375 Betacoronavirus pandemicum 3418604 Viruses Viruses 80.5 1.72e-10   NTclustered gi|2155043487|emb|OV016108.1| 2697049 g25971 i0 94.231 13.3486005089059 52 3 13 0 342 393 29941 29890 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 5246 80.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
17439238 17439238 PRJNA884104_S_NODE_56194_length_279_cov_1.174757_g55451_i0 PRJNA884104 56194 279 1.174757 3.27757203 Betacoronavirus pandemicum 3418604 Viruses Viruses 106 1.94e-18   NTclustered gi|2155043487|emb|OV016108.1| 2697049 g55451 i0 95.455 27.0358422939068 66 3 24 0 214 279 29941 29876 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7543 106 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
17439458 17439458 PRJNA884104_S_NODE_67734_length_252_cov_1.391061_g66991_i0 PRJNA884104 67734 252 1.391061 3.50547372 Betacoronavirus pandemicum 3418604 Viruses Viruses 80.5 1.05e-10   NTclustered gi|2560522426|emb|OY698221.1| 2697049 g66991 i0 92.857 23.1190476190476 56 2 22 2 1 56 11709 11656 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 5826 80.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
17439463 17439463 PRJNA884104_S_NODE_67934_length_252_cov_0.977654_g67191_i0 PRJNA884104 67934 252 0.977654 2.46368808 Trichovirus mali 12175 Viruses Viruses 394 3.3e-105   NTclustered gi|1214575054|gb|KY310577.1| 12175 g67191 i0 95.181 14.5119047619048 249 12 99 0 1 249 3689 3937 Trichovirus mali isolate JH, complete genome blastn 3657 394 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
18712413 18712413 PRJNA884104_S_NODE_53935_length_285_cov_1.117925_g53192_i0 PRJNA884104 53935 285 1.117925 3.18608625 Trichovirus mali 12175 Viruses Viruses 453 6.18e-123   NTclustered gi|2426332694|gb|ON024146.1| 12175 g53192 i0 95.423 11.9719298245614 284 13 99 0 2 285 3252 3535 Apple chlorotic leaf spot virus isolate NODE-14 coat protein (CP) gene, complete cds blastn 3412 453 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
18712492 18712492 PRJNA884104_S_NODE_58415_length_274_cov_1.019900_g57672_i0 PRJNA884104 58415 274 1.0199 2.794526 Trichovirus chloropersicae 3432984 Viruses Viruses 315 2.91e-81   NTclustered gi|2504505089|gb|OP923917.1| 2358294 g57672 i0 88.06 10.9890510948905 268 29 98 1 7 274 7131 7395 Peach chlorotic leaf spot virus isolate Apricot XJ, complete genome blastn 3011 315 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus chloropersicae
18712521 18712521 PRJNA884104_S_NODE_59855_length_270_cov_1.365482_g59112_i0 PRJNA884104 59855 270 1.365482 3.6868014 Betacoronavirus pandemicum 3418604 Viruses Viruses 52.8 0.025   NTclustered gi|2165835560|emb|OV196626.1| 2697049 g59112 i0 100 1.03703703703704 28 0 10 0 243 270 30015 30042 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 280 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
18712985 18712985 PRJNA884104_S_NODE_83875_length_242_cov_1.147929_g83132_i0 PRJNA884104 83875 242 1.147929 2.77798818 Trichovirus chloropersicae 3432984 Viruses Viruses 233 7.25e-57   NTclustered gi|2504505089|gb|OP923917.1| 2358294 g83132 i0 84.232 14.595041322314 241 36 99 2 3 242 6569 6808 Peach chlorotic leaf spot virus isolate Apricot XJ, complete genome blastn 3532 233 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus chloropersicae
19092739 19092739 PRJNA884104_S_NODE_54635_length_283_cov_1.423810_g53892_i0 PRJNA884104 54635 283 1.42381 4.0293823 Viruses 10239 Viruses Viruses 100 9.2e-17   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g53892 i0 95.312 26.2508833922261 64 1 23 2 1 64 174 235 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7429 100 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
19987439 19987439 PRJNA884104_S_NODE_4156_length_989_cov_3.286026_g3662_i0 PRJNA884104 4156 989 3.286026 32.49879714 Peach virus T 1958978 Viruses Viruses 1393 0   NTclustered gi|1180718232|gb|KY348615.1| 1958978 g3662 i0 92.261 5.9726996966633 982 76 99 0 7 988 6420 5439 Peach virus T isolate JH polyprotein and putative movement protein genes, complete cds blastn 5907 1393 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Peach virus T
19988120 19988120 PRJNA884104_S_NODE_76996_length_246_cov_1.023121_g76253_i0 PRJNA884104 76996 246 1.023121 2.51687766 Betacoronavirus pandemicum 3418604 Viruses Viruses 75 4.74e-9   NTclustered gi|2165834600|emb|OV196107.1| 2697049 g76253 i0 91.228 19.7560975609756 57 2 23 3 190 246 123 70 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4860 75 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
19988155 19988155 PRJNA884104_S_NODE_78716_length_245_cov_1.023256_g77973_i0 PRJNA884104 78716 245 1.023256 2.5069772 Betacoronavirus pandemicum 3418604 Viruses Viruses 76.8 1.31e-9   NTclustered gi|2165835560|emb|OV196626.1| 2697049 g77973 i0 100 19.7183673469388 41 0 17 0 10 50 182 222 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4831 76.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
21262771 21262771 PRJNA884104_S_NODE_42997_length_317_cov_1.139344_g42254_i0 PRJNA884104 42997 317 1.139344 3.61172048 Betacoronavirus pandemicum 3418604 Viruses Viruses 63.9 1.37e-5   NTclustered gi|2557646044|emb|OY675404.1| 2697049 g42254 i0 100 11.416403785489 34 0 11 0 284 317 18437 18470 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3619 63.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
21263165 21263165 PRJNA884104_S_NODE_63057_length_263_cov_0.742105_g62314_i0 PRJNA884104 63057 263 0.742105 1.95173615 Betacoronavirus pandemicum 3418604 Viruses Viruses 76.8 1.42e-9   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g62314 i0 94.118 18.5361216730038 51 1 19 2 213 263 236 188 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4875 76.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
22537446 22537446 PRJNA884104_S_NODE_37778_length_335_cov_5.583969_g37035_i0 PRJNA884104 37778 335 5.583969 18.70629615 Sugarcane mild mosaic virus 126071 Viruses Viruses 52.8 0.032   NTclustered gi|2370428304|gb|OM296203.1| 126071 g37035 i0 100 0.0835820895522388 28 0 8 0 1 28 6 33 Sugarcane mild mosaic virus isolate 16N-5 viral replicase, polyprotein, p6 protein, heat shock protein 70-like protein, heat shock protein 90, and major capsid protein genes, complete cds; and p24 protein gene, partial cds blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Ampelovirus Sugarcane mild mosaic virus
22537511 22537511 PRJNA884104_S_NODE_40858_length_324_cov_1.314741_g40115_i0 PRJNA884104 40858 324 1.314741 4.25976084 Trichovirus mali 12175 Viruses Viruses 544 4.12e-150   NTclustered gi|667714325|gb|KJ754185.1| 12175 g40115 i0 96.914 29.2469135802469 324 10 100 0 1 324 7 330 Apple chlorotic leaf spot virus isolate SDA3 coat protein gene, complete cds blastn 9476 544 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
23812648 23812648 PRJNA884104_S_NODE_23639_length_416_cov_11.002915_g22896_i0 PRJNA884104 23639 416 11.002915 45.7721264 Betacoronavirus pandemicum 3418604 Viruses Viruses 86.1 3.94e-12   NTclustered gi|2165834592|emb|OV196099.1| 2697049 g22896 i0 93.22 16.3485576923077 59 2 14 2 1 59 59 115 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 6801 86.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
23813278 23813278 PRJNA884104_S_NODE_55039_length_282_cov_1.186603_g54296_i0 PRJNA884104 55039 282 1.186603 3.34622046 Betacoronavirus pandemicum 3418604 Viruses Viruses 58.4 5.59e-4   NTclustered gi|2557639802|emb|OY695838.1| 2697049 g54296 i0 100 1.2198581560283701 31 0 11 0 252 282 4717 4747 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 344 58.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
23813475 23813475 PRJNA884104_S_NODE_65219_length_258_cov_1.140541_g64476_i0 PRJNA884104 65219 258 1.140541 2.94259578 Betacoronavirus pandemicum 3418604 Viruses Viruses 93.5 1.38e-14   NTclustered gi|2165834592|emb|OV196099.1| 2697049 g64476 i0 93.651 28.0271317829457 63 2 24 2 196 258 115 55 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7231 93.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
25087071 25087071 PRJNA884104_S_NODE_54280_length_284_cov_1.194313_g53537_i0 PRJNA884104 54280 284 1.194313 3.39184892 Betacoronavirus pandemicum 3418604 Viruses Viruses 97.1 1.19e-15   NTclustered gi|2165834316|emb|OV196022.1| 2697049 g53537 i0 95.161 26.0985915492958 62 1 22 2 1 62 531 590 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7412 97.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
25087217 25087217 PRJNA884104_S_NODE_61540_length_266_cov_1.316062_g60797_i0 PRJNA884104 61540 266 1.316062 3.50072492 Betacoronavirus pandemicum 3418604 Viruses Viruses 76.8 1.44e-9   NTclustered gi|2557646933|emb|OY676332.1| 2697049 g60797 i0 91.228 19.0112781954887 57 3 21 2 210 266 17606 17660 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 5057 76.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;