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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA884104" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 23 ✖

bioproject 1

  • PRJNA884104 · 23 ✖

analysis 1

  • blastn · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4689164 4689164 PRJNA884104_S_NODE_41964_length_320_cov_1.643725_g41221_i0 PRJNA884104 41964 320 1.643725 5.25992 Chlamydomonas reinhardtii 3055 Plants Plants 63.9 1.39e-5   NTclustered gi|2082238366|ref|XM_043059241.1| 3055 g41221 i0 91.304 0.23125 46 4 14 0 115 160 1511 1556 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g081250v5), mRNA blastn 74 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
4689218 4689218 PRJNA884104_S_NODE_44724_length_311_cov_1.773109_g43981_i0 PRJNA884104 44724 311 1.773109 5.51436899 Chlorella variabilis 554065 Plants Plants 191 5.899999999999998e-44   NTclustered gi|552846838|ref|XM_005851654.1| 554065 g43981 i0 79.225 6.98713826366559 284 51 90 5 32 311 523 802 Chlorella variabilis hypothetical protein (CHLNCDRAFT_29172) mRNA, complete cds blastn 2173 191 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
4689555 4689555 PRJNA884104_S_NODE_60884_length_268_cov_0.692308_g60141_i0 PRJNA884104 60884 268 0.692308 1.85538544 Chlamydomonas reinhardtii 3055 Plants Plants 52.8 0.025   NTclustered gi|2082239373|ref|XM_001699987.2| 3055 g60141 i0 90.476 0.156716417910448 42 0 16 4 8 49 101 138 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g097900v5), mRNA blastn 42 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
4690075 4690075 PRJNA884104_S_NODE_8744_length_684_cov_9.855974_g8047_i0 PRJNA884104 8744 684 9.855974 67.41486216 Volvox carteri 3067 Plants Plants 56.5 0.005   NTclustered gi|302849719|ref|XM_002956343.1| 3068 g8047 i0 100 0.043859649122807 30 0 4 0 538 567 666 637 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_97422), partial mRNA blastn 30 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
4690087 4690087 PRJNA884104_S_NODE_9024_length_672_cov_2.367279_g8322_i0 PRJNA884104 9024 672 2.367279 15.90811488 Chlamydomonas reinhardtii 3055 Plants Plants 647 0   NTclustered gi|2082262214|ref|XM_001693945.2| 3055 g8322 i0 85.238 90.7053571428571 630 91 94 2 4 632 739 111 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g549550v5), mRNA blastn 60954 647 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
5069276 5069276 PRJNA884104_S_NODE_32444_length_359_cov_3.559441_g31701_i0 PRJNA884104 32444 359 3.559441 12.77839319 Eukaryota 2759 Plants Plants 664 0   NTclustered gi|1714003650|gb|MN243923.1| 3079 g31701 i0 100 99.7883008356546 359 0 100 0 1 359 514 872 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 35824 664 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
7239537 7239537 PRJNA884104_S_NODE_73706_length_248_cov_0.880000_g72963_i0 PRJNA884104 73706 248 0.88 2.1824 Volvox carteri 3067 Plants Plants 60.2 1.34e-4   NTclustered gi|302854731|ref|XM_002958825.1| 3068 g72963 i0 100 0.834677419354839 32 0 13 0 106 137 5561 5530 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_120064), partial mRNA blastn 207 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
8513216 8513216 PRJNA884104_S_NODE_20107_length_449_cov_6.970745_g19364_i0 PRJNA884104 20107 449 6.970745 31.29864505 Chlamydomonas reinhardtii 3055 Plants Plants 117 1.52e-21   NTclustered gi|2082253493|ref|XM_043066154.1| 3055 g19364 i0 86.667 1.0445434298441 105 14 23 0 80 184 652 756 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g405106v5), mRNA blastn 469 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
8513684 8513684 PRJNA884104_S_NODE_43507_length_315_cov_1.454545_g42764_i0 PRJNA884104 43507 315 1.454545 4.58181675 Coccomyxa subellipsoidea 248742 Plants Plants 106 2.23e-18   NTclustered gi|545362617|ref|XM_005646465.1| 574566 g42764 i0 80.42 0.453968253968254 143 24 45 3 19 159 242 102 Coccomyxa subellipsoidea C-169 eukaryotic initiation factor mRNA blastn 143 106 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
11063797 11063797 PRJNA884104_S_NODE_15369_length_512_cov_4.419134_g14631_i0 PRJNA884104 15369 512 4.419134 22.62596608 Chlorella variabilis 554065 Plants Plants 198 6.079999999999999e-46   NTclustered gi|552841436|ref|XM_005850245.1| 554065 g14631 i0 81.008 30.5859375 258 42 50 7 235 490 291 39 Chlorella variabilis hypothetical protein (CHLNCDRAFT_30036) mRNA, complete cds blastn 15660 198 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
12340264 12340264 PRJNA884104_S_NODE_60230_length_269_cov_1.561224_g59487_i0 PRJNA884104 60230 269 1.561224 4.19969256 Chlamydomonas reinhardtii 3055 Plants Plants 91.6 5.22e-14   NTclustered gi|2082269567|ref|XM_001691496.2| 3055 g59487 i0 80.645 9.40520446096654 124 18 45 6 132 252 209 329 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_17g708150v5), mRNA blastn 2530 91.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16163916 16163916 PRJNA884104_S_NODE_6293_length_809_cov_7.350543_g5678_i0 PRJNA884104 6293 809 7.350543 59.46589287 Chlamydomonas reinhardtii 3055 Plants Plants 394 1.1699999999999999e-104   NTclustered gi|2082235498|ref|XM_001700320.2| 3055 g5678 i0 83.924 49.3683559950556 423 57 52 5 34 455 48 460 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g002300v5), mRNA blastn 39939 394 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16164405 16164405 PRJNA884104_S_NODE_9293_length_662_cov_5.125637_g8590_i0 PRJNA884104 9293 662 5.125637 33.93171694 Chlamydomonas reinhardtii 3055 Plants Plants 335 5.839999999999999e-87   NTclustered gi|2082248650|ref|XM_043063418.1| 3055 g8590 i0 77.526 73.1374622356496 574 117 86 11 21 588 290 857 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA blastn 48417 335 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16543860 16543860 PRJNA884104_S_NODE_76553_length_246_cov_3.485549_g75810_i0 PRJNA884104 76553 246 3.485549 8.57445054 Eukaryota 2759 Plants Plants 455 1.4500000000000002e-123   NTclustered gi|1714003650|gb|MN243923.1| 3079 g75810 i0 100 100.032520325203 246 0 100 0 1 246 47 292 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 24608 455 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
17438350 17438350 PRJNA884104_S_NODE_10814_length_614_cov_3.171904_g10096_i0 PRJNA884104 10814 614 3.171904 19.47549056 Chlamydomonas reinhardtii 3055 Plants Plants 257 1.2e-63   NTclustered gi|2082238114|ref|XM_001701583.2| 3055 g10096 i0 77.07 1.46579804560261 471 93 76 14 3 466 159 621 Chlamydomonas reinhardtii ribosomal protein L19 (CHLRE_02g075700v5), mRNA blastn 900 257 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
18712502 18712502 PRJNA884104_S_NODE_58895_length_272_cov_2.321608_g58152_i0 PRJNA884104 58895 272 2.321608 6.31477376 Monoraphidium neglectum 145388 Plants Plants 220 6.47e-53   NTclustered gi|926781221|ref|XM_014043631.1| 145388 g58152 i0 83.544 85.0110294117647 237 37 87 2 37 272 383 148 Monoraphidium neglectum large subunit ribosomal protein L40e mRNA blastn 23123 220 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
21262269 21262269 PRJNA884104_S_NODE_19097_length_461_cov_5.056701_g18354_i0 PRJNA884104 19097 461 5.056701 23.31139161 Chlorella variabilis 554065 Plants Plants 211 6.98e-50   NTclustered gi|552813385|ref|XM_005843877.1| 554065 g18354 i0 81.439 8.13665943600868 264 43 57 6 106 366 1367 1107 Chlorella variabilis hypothetical protein (CHLNCDRAFT_59785) mRNA, complete cds blastn 3751 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
21262873 21262873 PRJNA884104_S_NODE_48477_length_300_cov_1.533040_g47734_i0 PRJNA884104 48477 300 1.53304 4.59912 Polytomella parva 51329 Plants Plants 132 3.48e-26   NTclustered gi|1861356287|gb|MT377371.1| 51329 g47734 i0 92.391 5.48666666666667 92 7 31 0 207 298 1346 1255 Polytomella parva clone 0016323601 succinate dehydrogenase [ubiquinone] flavoprotein subunit (SDHA) mRNA, complete cds; plastid blastn 1646 132 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella parva
22536967 22536967 PRJNA884104_S_NODE_13658_length_544_cov_3.203822_g12925_i0 PRJNA884104 13658 544 3.203822 17.42879168 Chlamydomonas reinhardtii 3055 Plants Plants 460 7.499999999999999e-125   NTclustered gi|2082243702|ref|XM_043061450.1| 3055 g12925 i0 85.022 79.4136029411765 454 66 83 2 3 455 1007 1459 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g204250v5), mRNA blastn 43201 460 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22537312 22537312 PRJNA884104_S_NODE_31658_length_363_cov_4.565517_g30915_i0 PRJNA884104 31658 363 4.565517 16.57282671 Chlamydomonas reinhardtii 3055 Plants Plants 95.3 5.64e-15   NTclustered gi|2082253493|ref|XM_043066154.1| 3055 g30915 i0 82.857 0.289256198347107 105 18 29 0 173 277 756 652 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g405106v5), mRNA blastn 105 95.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22538470 22538470 PRJNA884104_S_NODE_9478_length_656_cov_7.372213_g8773_i0 PRJNA884104 9478 656 7.372213 48.36171728 Volvox carteri 3067 Plants Plants 56.5 0.005   NTclustered gi|302849719|ref|XM_002956343.1| 3068 g8773 i0 100 0.0457317073170732 30 0 5 0 118 147 637 666 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_97422), partial mRNA blastn 30 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
22918908 22918908 PRJNA884104_S_NODE_76658_length_246_cov_1.705202_g75915_i0 PRJNA884104 76658 246 1.705202 4.19479692 Prototheca 3110 Plants Plants 198 2.7e-46   NTclustered gi|1159431142|gb|KX389284.1| 3112 g75915 i0 82.041 82.979674796748 245 32 97 11 7 245 991 1229 Prototheca zopfii isolate SAG-2063 alpha tubulin (TUA1) mRNA, complete cds blastn 20413 200 0.99 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca zopfii
25467911 25467911 PRJNA884104_S_NODE_44720_length_311_cov_1.873950_g43977_i0 PRJNA884104 44720 311 1.87395 5.8279845 Eukaryota 2759 Plants Plants 71.3 8.02e-8   NTclustered gi|302848242|ref|XM_002955608.1| 3068 g43977 i0 100 17.7749196141479 38 0 12 0 101 138 401 364 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_96536), partial mRNA blastn 5528 71.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;