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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA883229" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA883229 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
859983 859983 PRJNA883229_P_NODE_1681_length_480_cov_1.847666_g1635_i0 PRJNA883229 1681 480 1.847666 8.8687968 Philodina sp. NPS-2005 317012 Rotifera other_Eukaryota 357 8.849999999999997e-94   NTclustered gi|62362203|gb|AY942841.1| 317012 g1635 i0 81.465 5.01666666666667 437 79 91 2 45 480 71 506 Philodina sp. NPS-2005 guanine nucleotide binding protein beta polypeptide 2-like 1 mRNA, partial cds blastn 2408 357 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina sp. NPS-2005
3410721 3410721 PRJNA883229_P_NODE_2743_length_387_cov_1.987261_g2697_i0 PRJNA883229 2743 387 1.987261 7.69070007 Philodina roseola 96448 Rotifera other_Eukaryota 329 1.52e-85   NTclustered gi|209867641|gb|EU637019.1| 96448 g2697 i0 84.273 48.9483204134367 337 53 87 0 4 340 26374 26038 Philodina roseola tyramine beta hydroxylase-like protein, metallophosphoesterase domain containing 1-like protein, transmembrane protein 45b-like protein, solute carrier family 7-like protein, G protein-coupled receptor-like protein, serpin 6 precursor, molybdenum cofactor-like protein, hypothetical protein, ankyrin repeat containing protein, neuronal calcium sensor family member 2-like protein, HSP70-like protein, hypothetical protein, Hox-5b, Smc-like protein, and golgi autoantigen golgin subfamily a4-like protein genes, complete cds blastn 18943 329 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
5963270 5963270 PRJNA883229_P_NODE_4205_length_328_cov_3.054902_g4159_i0 PRJNA883229 4205 328 3.054902 10.02007856 Adineta vaga 104782 Rotifera other_Eukaryota 573 5.329999999999998e-159   NTclustered gi|259129963|gb|GQ398061.1| 104782 g4159 i0 98.171 4.46036585365854 328 6 100 0 1 328 10057 10384 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 1463 573 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
5963284 5963284 PRJNA883229_P_NODE_4985_length_308_cov_2.365957_g4939_i0 PRJNA883229 4985 308 2.365957 7.28714756 Adineta vaga complex sp. C JFF-2016 1813166 Rotifera other_Eukaryota 326 1.53e-84   NTclustered gi|1005061344|gb|KU861166.1| 1813166 g4939 i0 88.476 70.0876623376623 269 31 87 0 14 282 462 194 Adineta vaga complex sp. C JFF-2016 isolate H4-28a 82 kDa heat shock protein gene, partial cds blastn 21587 326 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. C JFF-2016
9787905 9787905 PRJNA883229_P_NODE_2528_length_400_cov_3.984709_g2482_i0 PRJNA883229 2528 400 3.984709 15.938836 Adineta vaga 104782 Rotifera other_Eukaryota 717 0   NTclustered gi|72153731|gb|DQ089739.1| 104782 g2482 i0 99 59.1275 400 4 100 0 1 400 2398 2797 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 23651 717 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
11063634 11063634 PRJNA883229_P_NODE_9189_length_252_cov_1.307263_g9143_i0 PRJNA883229 9189 252 1.307263 3.29430276 Habrotrocha constricta 104786 Rotifera other_Eukaryota 274 4.48e-69   NTclustered gi|402761789|gb|JX184026.1| 104786 g9143 i0 86.454 33.3928571428571 251 33 99 1 2 252 467 218 Habrotrocha constricta cytochrome b (CYTB) gene, complete cds; mitochondrial blastn 8415 274 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
12339111 12339111 PRJNA883229_P_NODE_610_length_762_cov_6.082729_g570_i0 PRJNA883229 610 762 6.082729 46.35039498 Philodina citrina 468664 Rotifera other_Eukaryota 811 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g570 i0 86.28 22.0866141732283 758 90 99 13 1 752 1659 2408 Philodina citrina complete mitochondrial genome blastn 16830 811 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
14887969 14887969 PRJNA883229_P_NODE_192_length_1247_cov_3.880750_g169_i0 PRJNA883229 192 1247 3.88075 48.3929525 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 1585 0   NTclustered gi|402761731|gb|JX183997.1| 104788 g169 i0 89.647 56.4266238973537 1246 127 99 2 1 1245 15 1259 Macrotrachela quadricornifera isolate HR cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 70364 1585 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
14888063 14888063 PRJNA883229_P_NODE_852_length_660_cov_1.524702_g809_i0 PRJNA883229 852 660 1.524702 10.0630332 Adineta vaga 104782 Rotifera other_Eukaryota 396 2.63e-105   NTclustered gi|187233667|gb|EU643500.1| 104782 g809 i0 79.852 68.6484848484849 541 109 82 0 5 545 614 74 Adineta vaga ribosomal protein L11 mRNA, partial cds blastn 45308 396 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
15269008 15269008 PRJNA883229_P_NODE_3012_length_373_cov_7.770000_g2966_i0 PRJNA883229 3012 373 7.77 28.9821 Adinetidae 104780 Rotifera other_Eukaryota 689 0   NTclustered gi|2537903788|gb|KM043253.2| 104782 g2966 i0 100 99.7479892761394 373 0 100 0 1 373 548 920 Adineta vaga voucher AD006 18S ribosomal RNA gene, partial sequence blastn 37206 689 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
16162707 16162707 PRJNA883229_P_NODE_4733_length_314_cov_2.149378_g4687_i0 PRJNA883229 4733 314 2.149378 6.74904692 Adineta vaga 104782 Rotifera other_Eukaryota 287 7.399999999999999e-73   NTclustered gi|187233665|gb|EU643499.1| 104782 g4687 i0 85.455 1.15286624203822 275 40 88 0 13 287 1 275 Adineta vaga ribosomal protein L26 mRNA, partial cds blastn 362 287 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
17818670 17818670 PRJNA883229_P_NODE_934_length_631_cov_2.885305_g891_i0 PRJNA883229 934 631 2.885305 18.20627455 Adineta 104781 Rotifera other_Eukaryota 1120 0   NTclustered gi|1005055512|gb|KU860655.1| 1813164 g891 i0 98.732 41.7527733755943 631 7 100 1 1 631 2027 1398 Adineta vaga complex sp. A JFF-2016 isolate H001 28S ribosomal RNA gene, partial sequence blastn 26346 1120 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. A JFF-2016
20367454 20367454 PRJNA883229_P_NODE_5596_length_295_cov_1.954955_g5550_i0 PRJNA883229 5596 295 1.954955 5.76711725 Adineta 104781 Rotifera other_Eukaryota 534 2.23e-147   NTclustered gi|72153731|gb|DQ089739.1| 104782 g5550 i0 99.322 92.1661016949153 295 2 100 0 1 295 796 502 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 27189 534 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
21643286 21643286 PRJNA883229_P_NODE_3997_length_335_cov_3.465649_g3951_i0 PRJNA883229 3997 335 3.465649 11.60992415 Opisthokonta 33154 Rotifera other_Eukaryota 603 6.9499999999999975e-168   NTclustered gi|259129963|gb|GQ398061.1| 104782 g3951 i0 99.104 76.9432835820895 335 3 100 0 1 335 6986 6652 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 25776 603 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;