RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA883229" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA883229 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16162660 16162660 PRJNA883229_P_NODE_16693_length_242_cov_0.923077_g16647_i0 PRJNA883229 16693 242 0.923077 2.23384634 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 62.1 3.62e-5   NTclustered gi|2621786307|emb|OY782765.1| 2614255 g16647 i0 94.872 3.6198347107438 39 2 19 0 103 141 1132434 1132396 MAG: Melioribacteraceae bacterium isolate b49f5fa7-6043-4eb4-88a3-53a29b1f0925 genome assembly, chromosome: 1 blastn 876 62.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
25467755 25467755 PRJNA883229_P_NODE_14080_length_245_cov_0.906977_g14034_i0 PRJNA883229 14080 245 0.906977 2.22209365 Pseudomonadati 3379134 Bacteria Bacteria 102 2.16e-17   NTclustered gi|2621786307|emb|OY782765.1| 2614255 g14034 i0 96.721 24.930612244898 61 2 25 0 185 245 2570708 2570648 MAG: Melioribacteraceae bacterium isolate b49f5fa7-6043-4eb4-88a3-53a29b1f0925 genome assembly, chromosome: 1 blastn 6108 102 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;