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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA883229" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA883229 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
859926 859926 PRJNA883229_P_NODE_12101_length_248_cov_0.891429_g12055_i0 PRJNA883229 12101 248 0.891429 2.21074392 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 89.8 1.71e-13   NTclustered gi|1958075319|gb|CP064995.1| 2026720 g12055 i0 88 0.30241935483871 75 9 30 0 59 133 93810 93884 Candidatus Saccharibacteria bacterium isolate Hjor_18-Q3-R7-51_MAXAC.102_uni chromosome, complete genome blastn 75 89.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
860026 860026 PRJNA883229_P_NODE_4661_length_316_cov_1.518519_g4615_i0 PRJNA883229 4661 316 1.518519 4.79852004 Minisyncoccus archaeiphilus 3238481 Bacteria Bacteria 63.9 1.37e-5   NTclustered gi|2849250805|dbj|AP038758.1| 3238481 g4615 i0 95 0.221518987341772 40 2 13 0 28 67 16134 16095 Candidatus Minisyncoccus archaeophilus PMX.108 DNA, complete genome blastn 70 63.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Minisyncoccales Minisyncoccaceae Minisyncoccus Minisyncoccus archaeiphilus
13613538 13613538 PRJNA883229_P_NODE_11791_length_249_cov_0.886364_g11745_i0 PRJNA883229 11791 249 0.886364 2.20704636 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 62.1 3.74e-5   NTclustered gi|2108435138|gb|CP070627.1| 2052149 g11745 i0 91.304 1.7429718875502 46 2 18 2 43 86 7052999 7052954 MAG: Candidatus Aminicenantes bacterium isolate bin99 chromosome blastn 434 62.1 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
14888069 14888069 PRJNA883229_P_NODE_8992_length_253_cov_0.866667_g8946_i0 PRJNA883229 8992 253 0.866667 2.19266751 uncultured Candidatus Berkelbacteria bacterium 1664347 Bacteria Bacteria 58.4 4.93e-4   NTclustered gi|2874253682|emb|OY969116.1| 1664347 g8946 i0 100 0.233201581027668 31 0 12 0 223 253 751589 751559 MAG: uncultured Candidatus Berkelbacteria bacterium isolate MFD04408.bin.c.6 genome assembly, chromosome: 1 blastn 59 58.4 1 Bacteria Bacteria candidate phyla   Candidatus Berkelbacteria         uncultured Candidatus Berkelbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;