RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA881257" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA881257 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8511510 8511510 PRJNA881257_P_NODE_16227_length_165_cov_1.568966_g15982_i0 PRJNA881257 16227 165 1.568966 2.5887939 uncultured Phycisphaerales bacterium 904075 Bacteria Bacteria 220 3.57e-53   NTclustered gi|2874253847|emb|OY969903.1| 904075 g15982 i0 91.772 105.957575757576 158 13 96 0 8 165 1831080 1831237 MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 blastn 17483 220 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     uncultured Phycisphaerales bacterium
9786456 9786456 PRJNA881257_P_NODE_14628_length_168_cov_1.310924_g14383_i0 PRJNA881257 14628 168 1.310924 2.20235232 uncultured Planctomycetota bacterium 120965 Bacteria Bacteria 267 4.63e-67   NTclustered gi|22203534|gb|AY124344.1| 120965 g14383 i0 95.238 116.541666666667 168 8 100 0 1 168 956 789 Uncultured planctomycete small subunit ribosomal RNA gene, partial sequence blastn 19579 267 1 Bacteria PVC group Pseudomonadati Planctomycetota         uncultured Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;