RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA881257" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA881257 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18709976 18709976 PRJNA881257_P_NODE_4775_length_354_cov_1.288525_g4531_i0 PRJNA881257 4775 354 1.288525 4.5613785 Encephalitozoon romaleae 571949 Fungi Fungi 305 2.33e-78   NTclustered gi|685881946|ref|XM_009267130.1| 1178016 g4531 i0 83.537 45.1186440677966 328 53 92 1 3 329 1092 765 Encephalitozoon romaleae SJ-2008 vacuolar ATP synthase subunit B partial mRNA blastn 15972 305 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon romaleae
19985310 19985310 PRJNA881257_P_NODE_336_length_1365_cov_131.110942_g250_i0 PRJNA881257 336 1365 131.110942 1789.6643583 Pseudoloma neurophilia 146866 Fungi Fungi 2447 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g250 i0 99.7 90.4527472527473 1335 4 98 0 1 1335 1336 2 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 123468 2447 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;