RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA881257" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA881257 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3409273 3409273 PRJNA881257_P_NODE_11403_length_193_cov_1.062500_g11158_i0 PRJNA881257 11403 193 1.0625 2.050625 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 261 2.54e-65   NTclustered gi|2258874820|gb|CP060231.1| 2052152 g11158 i0 91.579 646.658031088083 190 14 98 2 2 191 177340 177527 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-36 chromosome blastn 124805 261 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
3409359 3409359 PRJNA881257_P_NODE_5523_length_319_cov_1.537037_g5279_i0 PRJNA881257 5523 319 1.537037 4.90314803 Candidatus Saccharibacteria bacterium YM_S32_TM7_50_20 2056494 Bacteria Bacteria 492 1.49e-134   NTclustered gi|1340357306|gb|CP025011.1| 2056494 g5279 i0 94.654 94.0752351097179 318 15 99 1 2 317 1286374 1286691 Candidatus Saccharibacteria bacterium YM_S32_TM7_50_20 chromosome, complete genome blastn 30010 492 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium YM_S32_TM7_50_20

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;