contig_metadata
6 rows where analysis = "blastn", bioproject = "PRJNA879314" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7236058 | 7236058 | PRJNA879314_P_NODE_8206_length_247_cov_0.896552_g8156_i0 | PRJNA879314 | 8206 | 247 | 0.896552 | 2.21448344 | Treponema ruminis | 744515 | Bacteria | Bacteria | 156 | 1.65e-33 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g8156 | i0 | 79.221 | 0.935222672064777 | 231 | 42 | 92 | 4 | 19 | 246 | 224985 | 225212 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 231 | 156 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 9785768 | 9785768 | PRJNA879314_P_NODE_8728_length_246_cov_0.901734_g8678_i0 | PRJNA879314 | 8728 | 246 | 0.901734 | 2.21826564 | Treponema parvum | 138851 | Bacteria | Bacteria | 209 | 1.25e-49 | NTclustered | gi|2023447176|gb|CP054142.1| | 138851 | g8678 | i0 | 84.434 | 0.861788617886179 | 212 | 33 | 86 | 0 | 2 | 213 | 1579709 | 1579920 | Treponema parvum strain ATCC 700770 chromosome, complete genome | blastn | 212 | 209 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema parvum | ||
| 11444169 | 11444169 | PRJNA879314_P_NODE_2849_length_291_cov_1.206422_g2799_i0 | PRJNA879314 | 2849 | 291 | 1.206422 | 3.51068802 | Bacteria | 2 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|1464584672|gb|CP030147.1| | 1137606 | g2799 | i0 | 100 | 1.01030927835052 | 30 | 0 | 10 | 0 | 2 | 31 | 874248 | 874219 | Leptospira mayottensis strain MDI272 chromosome I, complete sequence | blastn | 294 | 56.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mayottensis | ||
| 13611536 | 13611536 | PRJNA879314_P_NODE_7551_length_248_cov_0.891429_g7501_i0 | PRJNA879314 | 7551 | 248 | 0.891429 | 2.21074392 | Treponema peruense | 2787628 | Bacteria | Bacteria | 187 | 5.8899999999999985e-43 | NTclustered | gi|1946838279|gb|CP064936.1| | 2787628 | g7501 | i0 | 81.466 | 8.69354838709677 | 232 | 39 | 93 | 3 | 13 | 242 | 1459910 | 1460139 | Treponema peruense strain RCC2812 chromosome, complete genome | blastn | 2156 | 187 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema peruense | ||
| 17436054 | 17436054 | PRJNA879314_P_NODE_5834_length_251_cov_0.876404_g5784_i0 | PRJNA879314 | 5834 | 251 | 0.876404 | 2.19977404 | Treponema bryantii | 163 | Bacteria | Bacteria | 244 | 3.5000000000000003e-60 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g5784 | i0 | 85.294 | 1.1792828685259 | 238 | 33 | 94 | 2 | 15 | 251 | 386958 | 387194 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 296 | 244 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 18709294 | 18709294 | PRJNA879314_P_NODE_8075_length_247_cov_0.896552_g8025_i0 | PRJNA879314 | 8075 | 247 | 0.896552 | 2.21448344 | Treponema bryantii | 163 | Bacteria | Bacteria | 268 | 2.04e-67 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g8025 | i0 | 86.235 | 1 | 247 | 34 | 100 | 0 | 1 | 247 | 190511 | 190757 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 247 | 268 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;