contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA879314" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 857935 | 857935 | PRJNA879314_P_NODE_8381_length_247_cov_0.896552_g8331_i0 | PRJNA879314 | 8381 | 247 | 0.896552 | 2.21448344 | Anaeromyxobacter oryzae | 2918170 | Bacteria | Bacteria | 244 | 3.43e-60 | NTclustered | gi|2199265233|dbj|AP025591.1| | 2918170 | g8331 | i0 | 84.836 | 4.00404858299595 | 244 | 35 | 98 | 2 | 5 | 247 | 755282 | 755524 | Anaeromyxobacter oryzae DNA, complete genome | blastn | 989 | 244 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter oryzae | ||
| 2133244 | 2133244 | PRJNA879314_P_NODE_7102_length_249_cov_0.886364_g7052_i0 | PRJNA879314 | 7102 | 249 | 0.886364 | 2.20704636 | Anaeromyxobacter oryzae | 2918170 | Bacteria | Bacteria | 217 | 7.55e-52 | NTclustered | gi|2199265233|dbj|AP025591.1| | 2918170 | g7052 | i0 | 83.197 | 1.95180722891566 | 244 | 33 | 96 | 7 | 2 | 241 | 293680 | 293441 | Anaeromyxobacter oryzae DNA, complete genome | blastn | 486 | 217 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter oryzae | ||
| 2133281 | 2133281 | PRJNA879314_P_NODE_9782_length_244_cov_0.912281_g9732_i0 | PRJNA879314 | 9782 | 244 | 0.912281 | 2.22596564 | Archangium violaceum | 83451 | Bacteria | Bacteria | 150 | 7.589999999999999e-32 | NTclustered | gi|1981856374|gb|CP069338.1| | 83451 | g9732 | i0 | 89.744 | 8.07377049180328 | 117 | 12 | 48 | 0 | 4 | 120 | 9697396 | 9697280 | Archangium violaceum strain SDU34 chromosome, complete genome | blastn | 1970 | 150 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 3408643 | 3408643 | PRJNA879314_P_NODE_3503_length_274_cov_1.248756_g3453_i0 | PRJNA879314 | 3503 | 274 | 1.248756 | 3.42159144 | Pseudomyxococcus hansupus | 1297742 | Bacteria | Bacteria | 167 | 8.609999999999999e-37 | NTclustered | gi|891158403|gb|CP012109.1| | 1297742 | g3453 | i0 | 81.553 | 21.6240875912409 | 206 | 34 | 74 | 4 | 31 | 234 | 6311825 | 6311622 | Myxococcus hansupus strain mixupus chromosome, complete genome | blastn | 5925 | 167 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pseudomyxococcus | Pseudomyxococcus hansupus | ||
| 8510843 | 8510843 | PRJNA879314_P_NODE_8327_length_247_cov_0.896552_g8277_i0 | PRJNA879314 | 8327 | 247 | 0.896552 | 2.21448344 | Corallococcus coralloides | 184914 | Bacteria | Bacteria | 233 | 7.429999999999999e-57 | NTclustered | gi|1561763003|gb|CP034669.1| | 184914 | g8277 | i0 | 84.746 | 5.93522267206478 | 236 | 32 | 95 | 3 | 1 | 234 | 7435610 | 7435843 | Corallococcus coralloides strain B035 chromosome, complete genome | blastn | 1466 | 233 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus coralloides | ||
| 11061509 | 11061509 | PRJNA879314_P_NODE_4609_length_253_cov_0.866667_g4559_i0 | PRJNA879314 | 4609 | 253 | 0.866667 | 2.19266751 | Haliangium ochraceum | 80816 | Bacteria | Bacteria | 183 | 7.8e-42 | NTclustered | gi|262076673|gb|CP001804.1| | 502025 | g4559 | i0 | 81.498 | 47.4822134387352 | 227 | 38 | 89 | 4 | 4 | 228 | 3407134 | 3407358 | Haliangium ochraceum DSM 14365, complete genome | blastn | 12013 | 183 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Haliangium | Haliangium ochraceum | |||
| 13994238 | 13994238 | PRJNA879314_P_NODE_7071_length_249_cov_0.886364_g7021_i0 | PRJNA879314 | 7071 | 249 | 0.886364 | 2.20704636 | Myxococcus | 32 | Bacteria | Bacteria | 433 | 6.89e-117 | NTclustered | gi|2318731907|gb|CP104804.1| | 34 | g7021 | i0 | 97.992 | 20.9598393574297 | 249 | 5 | 100 | 0 | 1 | 249 | 2760927 | 2761175 | Myxococcus xanthus strain DK1050 chromosome | blastn | 5219 | 433 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 14885894 | 14885894 | PRJNA879314_P_NODE_6012_length_251_cov_0.876404_g5962_i0 | PRJNA879314 | 6012 | 251 | 0.876404 | 2.19977404 | Anaeromyxobacter dehalogenans | 161493 | Bacteria | Bacteria | 287 | 5.73e-73 | NTclustered | gi|85772941|gb|CP000251.1| | 290397 | g5962 | i0 | 87.302 | 68.5577689243028 | 252 | 30 | 100 | 2 | 1 | 251 | 4321841 | 4321591 | Anaeromyxobacter dehalogenans 2CP-C, complete genome | blastn | 17208 | 287 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter dehalogenans | ||
| 15268307 | 15268307 | PRJNA879314_P_NODE_10472_length_243_cov_0.917647_g10422_i0 | PRJNA879314 | 10472 | 243 | 0.917647 | 2.22988221 | Polyangiaceae | 49 | Bacteria | Bacteria | 243 | 1.2100000000000004e-59 | NTclustered | gi|908353314|gb|CP012159.1| | 52 | g10422 | i0 | 85 | 126.242798353909 | 240 | 34 | 100 | 2 | 5 | 243 | 10485722 | 10485484 | Chondromyces crocatus strain Cm c5, complete genome | blastn | 30677 | 243 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 16542932 | 16542932 | PRJNA879314_P_NODE_3033_length_286_cov_1.136150_g2983_i0 | PRJNA879314 | 3033 | 286 | 1.13615 | 3.249389 | Anaeromyxobacter | 161492 | Bacteria | Bacteria | 425 | 1.35e-114 | NTclustered | gi|85772941|gb|CP000251.1| | 290397 | g2983 | i0 | 93.662 | 74.8706293706294 | 284 | 18 | 99 | 0 | 3 | 286 | 2615714 | 2615431 | Anaeromyxobacter dehalogenans 2CP-C, complete genome | blastn | 21413 | 425 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter dehalogenans | ||
| 20366710 | 20366710 | PRJNA879314_P_NODE_4996_length_252_cov_0.871508_g4946_i0 | PRJNA879314 | 4996 | 252 | 0.871508 | 2.19620016 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 141 | 4.74e-29 | NTclustered | gi|2235996827|gb|CP079217.1| | 2567896 | g4946 | i0 | 80.628 | 10.8849206349206 | 191 | 29 | 74 | 7 | 59 | 245 | 7649081 | 7649267 | Polyangium aurulentum strain SDU3-1 chromosome, complete genome | blastn | 2743 | 141 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | Polyangium aurulentum | |||
| 21259862 | 21259862 | PRJNA879314_P_NODE_10317_length_243_cov_0.917647_g10267_i0 | PRJNA879314 | 10317 | 243 | 0.917647 | 2.22988221 | Anaeromyxobacter sp. Fw109-5 | 404589 | Bacteria | Bacteria | 263 | 9.3e-66 | NTclustered | gi|152026452|gb|CP000769.1| | 404589 | g10267 | i0 | 86.364 | 4.73251028806584 | 242 | 31 | 99 | 2 | 3 | 243 | 135697 | 135457 | Anaeromyxobacter sp. Fw109-5, complete genome | blastn | 1150 | 263 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter sp. Fw109-5 | ||
| 23809992 | 23809992 | PRJNA879314_P_NODE_10099_length_244_cov_0.912281_g10049_i0 | PRJNA879314 | 10099 | 244 | 0.912281 | 2.22596564 | Anaeromyxobacter oryzae | 2918170 | Bacteria | Bacteria | 161 | 3.5e-35 | NTclustered | gi|2199265233|dbj|AP025591.1| | 2918170 | g10049 | i0 | 80.269 | 1.7827868852459 | 223 | 36 | 89 | 8 | 1 | 218 | 2862977 | 2863196 | Anaeromyxobacter oryzae DNA, complete genome | blastn | 435 | 161 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter oryzae | ||
| 24191865 | 24191865 | PRJNA879314_P_NODE_11079_length_242_cov_0.923077_g11029_i0 | PRJNA879314 | 11079 | 242 | 0.923077 | 2.23384634 | Myxococcus | 32 | Bacteria | Bacteria | 84.2 | 7.73e-12 | NTclustered | gi|2869653495|gb|CP175551.1| | 33 | g11029 | i0 | 76.301 | 4.71487603305785 | 173 | 31 | 69 | 8 | 16 | 183 | 10750757 | 10750590 | Myxococcus fulvus strain KYC1117 chromosome, complete genome | blastn | 1141 | 84.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus fulvus | ||
| 25467098 | 25467098 | PRJNA879314_P_NODE_9800_length_244_cov_0.912281_g9750_i0 | PRJNA879314 | 9800 | 244 | 0.912281 | 2.22596564 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 111 | 3.58e-20 | NTclustered | gi|908353314|gb|CP012159.1| | 52 | g9750 | i0 | 94.444 | 52.0245901639344 | 72 | 4 | 30 | 0 | 165 | 236 | 5475467 | 5475538 | Chondromyces crocatus strain Cm c5, complete genome | blastn | 12694 | 111 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;