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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA879314" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA879314 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2133182 2133182 PRJNA879314_P_NODE_2282_length_314_cov_1.514523_g2232_i0 PRJNA879314 2282 314 1.514523 4.75560222 Pseudoloma neurophilia 146866 Fungi Fungi 575 1.4099999999999994e-159   NTclustered gi|11993647|gb|AF322654.1| 146866 g2232 i0 99.682 99.8980891719745 314 1 100 0 1 314 912 1225 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 31368 575 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
3792308 3792308 PRJNA879314_P_NODE_3483_length_274_cov_1.930348_g3433_i0 PRJNA879314 3483 274 1.930348 5.28915352 Heterosporis 157917 Fungi Fungi 339 1.73e-88   NTclustered gi|448278452|gb|KC137548.1| 1289055 g3433 i0 89.13 40.9087591240876 276 24 99 4 4 274 2237 1963 Heterosporis sp. NBDP-2013a isolate MN/WAE small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11209 339 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
7235987 7235987 PRJNA879314_P_NODE_246_length_835_cov_2.686352_g208_i0 PRJNA879314 246 835 2.686352 22.4310392 Pseudoloma neurophilia 146866 Fungi Fungi 1530 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g208 i0 99.641 97.5041916167665 835 3 100 0 1 835 859 25 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 81416 1530 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
13611532 13611532 PRJNA879314_P_NODE_7211_length_248_cov_1.565714_g7161_i0 PRJNA879314 7211 248 1.565714 3.88297072 Pseudoloma neurophilia 146866 Fungi Fungi 449 6.81e-122   NTclustered gi|11993647|gb|AF322654.1| 146866 g7161 i0 99.194 82.875 248 2 100 0 1 248 1684 1931 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20553 449 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;