RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA879314" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA879314 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8510824 8510824 PRJNA879314_P_NODE_6707_length_249_cov_0.886364_g6657_i0 PRJNA879314 6707 249 0.886364 2.20704636 Lentinus tigrinus 5365 Fungi Fungi 110 1.32e-19   NTclustered gi|2797376130|ref|XM_067677658.1| 1328758 g6657 i0 86.139 0.405622489959839 101 14 41 0 1 101 28 128 Lentinus tigrinus ALCF2SS1-7 MAS20-domain-containing protein (L226DRAFT_498300), partial mRNA blastn 101 110 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Lentinus Lentinus tigrinus
9785696 9785696 PRJNA879314_P_NODE_3008_length_287_cov_1.070093_g2958_i0 PRJNA879314 3008 287 1.070093 3.07116691 Ganoderma boninense 34458 Fungi Fungi 99 3.36e-16   NTclustered gi|1768659916|emb|LR727948.1| 34458 g2958 i0 93.846 0.226480836236934 65 4 23 0 223 287 488 424 Ganoderma boninense G5EHQ9 gene for NmrA domain-containing protein blastn 65 99 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma boninense
12337013 12337013 PRJNA879314_P_NODE_9050_length_246_cov_0.872832_g9000_i0 PRJNA879314 9050 246 0.872832 2.14716672 Apiotrichum porosum 105984 Fungi Fungi 52.8 0.022   NTclustered gi|1607528374|ref|XM_028617027.1| 105984 g9000 i0 100 0.113821138211382 28 0 11 0 145 172 1003 976 Apiotrichum porosum uncharacterized protein (EHS24_001226), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Apiotrichum Apiotrichum porosum
16160482 16160482 PRJNA879314_P_NODE_10373_length_243_cov_0.917647_g10323_i0 PRJNA879314 10373 243 0.917647 2.22988221 Ganoderma subamboinense 34466 Fungi Fungi 401 1.8899999999999993e-107   NTclustered gi|2192917214|ref|NC_060422.1| 34466 g10323 i0 96.708 7.31687242798354 243 5 100 1 1 243 61136 61375 Ganoderma subamboinense mitochondrion, complete sequence blastn 1778 401 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma subamboinense
18709287 18709287 PRJNA879314_P_NODE_7795_length_248_cov_0.862857_g7745_i0 PRJNA879314 7795 248 0.862857 2.13988536 Ganoderma boninense 34458 Fungi Fungi 150 7.729999999999999e-32   NTclustered gi|1768655236|emb|LR725853.1| 34458 g7745 i0 94.792 0.725806451612903 96 5 72 0 1 96 2065 1970 Ganoderma boninense Q8Y8N0 gene for ATP-dependent RNA helicase CshA (EC 3.6.4.13) blastn 180 150 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma boninense
19091887 19091887 PRJNA879314_P_NODE_2115_length_322_cov_1.566265_g2065_i0 PRJNA879314 2115 322 1.566265 5.0433733 Agaricomycetes 155619 Fungi Fungi 534 2.46e-147   NTclustered gi|827046364|ref|NC_027188.1| 29884 g2065 i0 97.152 5.88509316770186 316 9 98 0 7 322 4364 4049 Ganoderma applanatum strain CGMCC5.249 mitochondrion, complete genome blastn 1895 536 0.996268656716418 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma applanatum
20366700 20366700 PRJNA879314_P_NODE_1716_length_346_cov_0.857143_g1666_i0 PRJNA879314 1716 346 0.857143 2.96571478 Polyporaceae 5317 Fungi Fungi 569 7.31e-158   NTclustered gi|2206971136|ref|NC_061293.1| 1173714 g1666 i0 96.264 66.7109826589595 348 11 100 2 1 346 6220 5873 Ganoderma multipileum mitochondrion, complete genome blastn 23082 569 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma multipileum
22534558 22534558 PRJNA879314_P_NODE_4878_length_252_cov_1.307263_g4828_i0 PRJNA879314 4878 252 1.307263 3.29430276 Ganoderma resinaceum 34465 Fungi Fungi 298 2.66e-76   NTclustered gi|2713138142|emb|OZ026805.1| 34465 g4828 i0 89.167 1.96825396825397 240 24 95 2 1 240 1813 2050 Ganoderma resinaceum genome assembly, organelle: mitochondrion blastn 496 298 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma resinaceum
23810009 23810009 PRJNA879314_P_NODE_1919_length_332_cov_1.100386_g1869_i0 PRJNA879314 1919 332 1.100386 3.65328152 Ganoderma applanatum 29884 Fungi Fungi 564 3.2499999999999996e-156   NTclustered gi|827046364|ref|NC_027188.1| 29884 g1869 i0 97.289 10.9939759036145 332 9 100 0 1 332 76220 75889 Ganoderma applanatum strain CGMCC5.249 mitochondrion, complete genome blastn 3650 564 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma applanatum
23810100 23810100 PRJNA879314_P_NODE_9939_length_244_cov_0.912281_g9889_i0 PRJNA879314 9939 244 0.912281 2.22596564 Ganoderma multipileum 1173714 Fungi Fungi 451 1.86e-122   NTclustered gi|2206971136|ref|NC_061293.1| 1173714 g9889 i0 100 54.5040983606557 244 0 100 0 1 244 42278 42521 Ganoderma multipileum mitochondrion, complete genome blastn 13299 451 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma multipileum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;