contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA879221" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4685521 | 4685521 | PRJNA879221_P_NODE_48044_length_250_cov_0.870056_g47904_i0 | PRJNA879221 | 48044 | 250 | 0.870056 | 2.17514 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 283 | 7.379999999999999e-72 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g47904 | i0 | 95.48 | 2.124 | 177 | 8 | 71 | 0 | 13 | 189 | 3492804 | 3492628 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 531 | 283 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 5960389 | 5960389 | PRJNA879221_P_NODE_50185_length_249_cov_0.875000_g50045_i0 | PRJNA879221 | 50185 | 249 | 0.875 | 2.17875 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 185 | 2.1299999999999994e-42 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g50045 | i0 | 80.408 | 1.45381526104418 | 245 | 47 | 98 | 1 | 3 | 247 | 145353 | 145596 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 362 | 185 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 11060801 | 11060801 | PRJNA879221_P_NODE_49649_length_249_cov_0.875000_g49509_i0 | PRJNA879221 | 49649 | 249 | 0.875 | 2.17875 | Bdellovibrio sp. HM001 | 3113894 | Bacteria | Bacteria | 355 | 1.53e-93 | NTclustered | gi|2663428595|dbj|AP029174.1| | 3113894 | g49509 | i0 | 92.369 | 1 | 249 | 19 | 100 | 0 | 1 | 249 | 3461639 | 3461391 | Bdellovibrio sp. HM001 DNA, complete genome | blastn | 249 | 355 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HM001 | ||
| 12336192 | 12336192 | PRJNA879221_P_NODE_43710_length_259_cov_1.655914_g43570_i0 | PRJNA879221 | 43710 | 259 | 1.655914 | 4.28881726 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 202 | 2.2099999999999997e-47 | NTclustered | gi|1326041851|gb|CP025704.1| | 960 | g43570 | i0 | 81.25 | 1.97683397683398 | 256 | 43 | 98 | 5 | 5 | 257 | 2082040 | 2081787 | Bacteriovorax stolpii strain DSM 12778 chromosome, complete genome | blastn | 512 | 202 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 12336356 | 12336356 | PRJNA879221_P_NODE_56350_length_245_cov_0.895349_g56210_i0 | PRJNA879221 | 56350 | 245 | 0.895349 | 2.19360505 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 202 | 2.08e-47 | NTclustered | gi|1326041851|gb|CP025704.1| | 960 | g56210 | i0 | 81.743 | 2.96326530612245 | 241 | 44 | 98 | 0 | 5 | 245 | 759356 | 759116 | Bacteriovorax stolpii strain DSM 12778 chromosome, complete genome | blastn | 726 | 202 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 16159732 | 16159732 | PRJNA879221_P_NODE_41353_length_269_cov_1.540816_g41213_i0 | PRJNA879221 | 41353 | 269 | 1.540816 | 4.14479504 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 407 | 4.569999999999999e-109 | NTclustered | gi|1326041851|gb|CP025704.1| | 960 | g41213 | i0 | 94.34 | 0.985130111524164 | 265 | 15 | 99 | 0 | 5 | 269 | 1221416 | 1221152 | Bacteriovorax stolpii strain DSM 12778 chromosome, complete genome | blastn | 265 | 407 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 17435414 | 17435414 | PRJNA879221_P_NODE_56334_length_245_cov_0.895349_g56194_i0 | PRJNA879221 | 56334 | 245 | 0.895349 | 2.19360505 | Bacteriovorax sp. HI3 | 2984118 | Bacteria | Bacteria | 255 | 1.57e-63 | NTclustered | gi|2321225508|dbj|AP026946.1| | 2984118 | g56194 | i0 | 86.235 | 41.9959183673469 | 247 | 20 | 100 | 9 | 1 | 245 | 3717805 | 3718039 | Bacteriovorax sp. HI3 DNA, complete genome | blastn | 10289 | 255 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. HI3 | ||
| 22533904 | 22533904 | PRJNA879221_P_NODE_53138_length_247_cov_0.885057_g52998_i0 | PRJNA879221 | 53138 | 247 | 0.885057 | 2.18609079 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 291 | 4.35e-74 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g52998 | i0 | 89.565 | 4.95141700404858 | 230 | 22 | 93 | 2 | 19 | 247 | 1308260 | 1308032 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 1223 | 291 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 22533916 | 22533916 | PRJNA879221_P_NODE_53938_length_247_cov_0.885057_g53798_i0 | PRJNA879221 | 53938 | 247 | 0.885057 | 2.18609079 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 298 | 2.6e-76 | NTclustered | gi|1326041851|gb|CP025704.1| | 960 | g53798 | i0 | 90 | 0.931174089068826 | 230 | 23 | 93 | 0 | 18 | 247 | 1196631 | 1196402 | Bacteriovorax stolpii strain DSM 12778 chromosome, complete genome | blastn | 230 | 298 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;