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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA879067" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 14 ✖

bioproject 1

  • PRJNA879067 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4684432 4684432 PRJNA879067_P_NODE_78024_length_347_cov_4.335766_g74538_i0 PRJNA879067 78024 347 4.335766 15.04510802 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.033   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g74538 i0 100 0.0806916426512968 28 0 8 0 317 344 32 5 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
4684558 4684558 PRJNA879067_P_NODE_82864_length_327_cov_1.618110_g79378_i0 PRJNA879067 82864 327 1.61811 5.2912197 Dimastigella trypaniformis 35226 Euglenozoa other_Eukaryota 521 1.9499999999999998e-143   NTclustered gi|20331089|gb|AY028447.1| 35226 g79378 i0 98.969 71.2477064220184 291 3 89 0 37 327 1 291 Dimastigella trypaniformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 23298 521 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Dimastigella Dimastigella trypaniformis
7232008 7232008 PRJNA879067_P_NODE_106606_length_247_cov_0.885057_g103120_i0 PRJNA879067 106606 247 0.885057 2.18609079 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 300 7.22e-77   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g103120 i0 91.667 2.63157894736842 216 18 87 0 1 216 4475 4260 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 650 300 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
7234276 7234276 PRJNA879067_P_NODE_78626_length_345_cov_1.415441_g75140_i0 PRJNA879067 78626 345 1.415441 4.88327145 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.033   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g75140 i0 100 0.0811594202898551 28 0 8 0 2 29 8 35 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
9783744 9783744 PRJNA879067_P_NODE_71268_length_381_cov_3.357143_g67783_i0 PRJNA879067 71268 381 3.357143 12.79071483 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.036   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g67783 i0 100 0.073490813648294 28 0 7 0 4 31 5 32 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
11059366 11059366 PRJNA879067_P_NODE_64909_length_417_cov_5.700581_g61424_i0 PRJNA879067 64909 417 5.700581 23.77142277 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.04   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g61424 i0 96.875 0.0767386091127098 32 0 8 1 385 416 38 8 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 32 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
12333797 12333797 PRJNA879067_P_NODE_31190_length_744_cov_3.137109_g27856_i0 PRJNA879067 31190 744 3.137109 23.34009096 Seculamonas ecuadoriensis 221724 Root_unresolved Root_unresolved 418 6.379999999999999e-112   NTclustered gi|2443276693|gb|OP760431.1| 221724 g27856 i0 79.602 29.6612903225806 603 107 80 15 109 703 1536 942 Seculamonas ecuadoriensis RNA-splicing ligase RtcB mRNA, complete cds blastn 22068 418 1 Eukaryota Discoba       Jakobida   Seculamonas Seculamonas ecuadoriensis
12334491 12334491 PRJNA879067_P_NODE_53190_length_499_cov_2.748826_g49706_i0 PRJNA879067 53190 499 2.748826 13.71664174 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.049   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g49706 i0 100 0.0561122244488978 28 0 6 0 470 497 35 8 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
14881708 14881708 PRJNA879067_P_NODE_101812_length_256_cov_1.213115_g98326_i0 PRJNA879067 101812 256 1.213115 3.1055744 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.023   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g98326 i0 100 0.109375 28 0 11 0 226 253 32 5 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
14884434 14884434 PRJNA879067_P_NODE_92452_length_289_cov_1.861111_g88966_i0 PRJNA879067 92452 289 1.861111 5.37861079 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.027   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g88966 i0 100 0.0968858131487889 28 0 10 0 260 287 32 5 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
16158100 16158100 PRJNA879067_P_NODE_54453_length_489_cov_3.911058_g50968_i0 PRJNA879067 54453 489 3.911058 19.12507362 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.048   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g50968 i0 100 0.0572597137014315 28 0 6 0 4 31 5 32 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
18706998 18706998 PRJNA879067_P_NODE_59615_length_452_cov_2.343008_g56130_i0 PRJNA879067 59615 452 2.343008 10.59039616 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.044   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g56130 i0 100 0.0619469026548673 28 0 6 0 424 451 31 4 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
25079876 25079876 PRJNA879067_P_NODE_106660_length_246_cov_2.329480_g103174_i0 PRJNA879067 106660 246 2.32948 5.7305208 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.022   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g103174 i0 100 0.113821138211382 28 0 11 0 216 243 32 5 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
25082545 25082545 PRJNA879067_P_NODE_95280_length_279_cov_1.946602_g91794_i0 PRJNA879067 95280 279 1.946602 5.43101958 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 375 1.3399999999999995e-99   NTclustered gi|2031941502|emb|OD957913.1| 5763 g91794 i0 99.043 0.74910394265233 209 2 75 0 71 279 369 161 Naegleria fowleri Karachi_NF001 strain blastn 209 375 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;