RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA876641" and tax_phylum = "Placozoa"

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tax_superkingdom 1

tax_phylum 1

  • Placozoa · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA876641 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8506019 8506019 PRJNA876641_P_NODE_14447_length_257_cov_1.652174_g14373_i0 PRJNA876641 14447 257 1.652174 4.24608718 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 89.8 1.78e-13   NTclustered gi|196000417|ref|XM_002110041.1| 10228 g14373 i0 100 0.350194552529183 48 0 35 0 210 257 542 495 Trichoplax adhaerens uncharacterized protein (TRIADDRAFT_20411), partial mRNA blastn 90 89.8 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
11056957 11056957 PRJNA876641_P_NODE_2449_length_452_cov_19.992084_g2375_i0 PRJNA876641 2449 452 19.992084 90.36421968 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 137 1.18e-27   NTclustered gi|196002220|ref|XM_002110942.1| 10228 g2375 i0 100 13.5265486725664 74 0 16 0 348 421 96 169 Trichoplax adhaerens uncharacterized protein (TRIADDRAFT_22994), partial mRNA blastn 6114 137 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
25079233 25079233 PRJNA876641_P_NODE_180_length_1238_cov_10.817167_g145_i0 PRJNA876641 180 1238 10.817167 133.91652746 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 429 5e-115   NTclustered gi|196005798|ref|XM_002112730.1| 10228 g145 i0 99.16 5.23101777059774 238 2 35 0 887 1124 1000 763 Trichoplax adhaerens uncharacterized protein (TRIADDRAFT_56242), partial mRNA blastn 6476 429 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;