RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA876641" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA876641 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13606915 13606915 PRJNA876641_P_NODE_3911_length_382_cov_1.912621_g3837_i0 PRJNA876641 3911 382 1.912621 7.30621222 Arachnula sp. CL12 862247 SAR_Eukaryotes SAR_Eukaryotes 327 5.41e-85   NTclustered gi|302026178|gb|GQ377695.1| 862247 g3837 i0 82.368 74.5680628272251 380 63 99 4 1 378 371 748 Arachnula sp. CL12 elongation factor 1 alpha mRNA, partial cds blastn 28485 327 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula sp. CL12
19979778 19979778 PRJNA876641_P_NODE_14056_length_259_cov_1.634409_g13982_i0 PRJNA876641 14056 259 1.634409 4.23311931 Arachnula sp. CL12 862247 SAR_Eukaryotes SAR_Eukaryotes 165 2.9e-36   NTclustered gi|302026178|gb|GQ377695.1| 862247 g13982 i0 81.043 49.972972972973 211 36 81 4 51 259 1282 1074 Arachnula sp. CL12 elongation factor 1 alpha mRNA, partial cds blastn 12943 165 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula sp. CL12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;