RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA876641" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA876641 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7616503 7616503 PRJNA876641_P_NODE_5726_length_335_cov_1.435115_g5652_i0 PRJNA876641 5726 335 1.435115 4.80763525 Lytechinus 7652 Echinodermata other_Eukaryota 265 3.73e-66   NTclustered gi|2707353226|ref|XM_064096309.1| 7653 g5652 i0 82.828 77.6567164179104 297 49 88 2 9 304 384 89 PREDICTED: Lytechinus pictus small ribosomal subunit protein uS12 (LOC129255934), mRNA blastn 26015 265 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
15266349 15266349 PRJNA876641_P_NODE_10692_length_278_cov_1.409756_g10618_i0 PRJNA876641 10692 278 1.409756 3.91912168 Echinoidea 7625 Echinodermata other_Eukaryota 60.2 1.53e-4   NTclustered gi|2707429299|ref|XR_008584250.2| 7653 g10618 i0 83.099 1.14748201438849 71 6 25 5 206 274 216 150 PREDICTED: Lytechinus pictus uncharacterized LOC129258280 (LOC129258280), ncRNA blastn 319 60.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;