RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA876641" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA876641 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9781208 9781208 PRJNA876641_P_NODE_8188_length_295_cov_1.387387_g8114_i0 PRJNA876641 8188 295 1.387387 4.09279165 Eunicella cavolini 317547 Cnidaria other_Eukaryota 172 2.0099999999999999e-38   NTclustered gi|2918369552|emb|OZ237724.1| 317547 g8114 i0 82.412 5.46440677966102 199 33 67 2 98 295 198087 197890 Eunicella cavolini genome assembly, chromosome: 8 blastn 1612 172 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
11056992 11056992 PRJNA876641_P_NODE_4049_length_378_cov_1.009836_g3975_i0 PRJNA876641 4049 378 1.009836 3.81718008 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 294 5.42e-75   NTclustered gi|2782854886|ref|XM_067057632.1| 252671 g3975 i0 83.03 87.7195767195767 330 50 87 6 1 327 1094 1420 PREDICTED: Clytia hemisphaerica V-type proton ATPase subunit B (LOC136801010), mRNA blastn 33158 294 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
21255125 21255125 PRJNA876641_P_NODE_11757_length_272_cov_1.386935_g11683_i0 PRJNA876641 11757 272 1.386935 3.7724632 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.007   NTclustered gi|2917940703|emb|OZ237559.1| 6108 g11683 i0 100 0.106617647058824 29 0 11 0 62 90 12632541 12632513 Anemonia sulcata genome assembly, chromosome: 5 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;