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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA876641" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA876641 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4681548 4681548 PRJNA876641_P_NODE_18444_length_247_cov_2.689655_g18370_i0 PRJNA876641 18444 247 2.689655 6.64344785 Batrachochytrium dendrobatidis 109871 Fungi Fungi 158 4.6e-34   NTclustered gi|575484485|ref|XM_006681474.1| 684364 g18370 i0 86.207 13.5222672064777 145 20 59 0 5 149 54 198 Batrachochytrium dendrobatidis JAM81 ribosomal 60S subunit protein L39 (BATDEDRAFT_91214), partial mRNA blastn 3340 158 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
5956574 5956574 PRJNA876641_P_NODE_5685_length_336_cov_1.555133_g5611_i0 PRJNA876641 5685 336 1.555133 5.22524688 Polychytrium aggregatum 110093 Fungi Fungi 185 2.9999999999999996e-42   NTclustered gi|2432155310|ref|XM_053111519.1| 110093 g5611 i0 78.648 5.26785714285714 281 58 83 2 12 291 335 56 Polychytrium aggregatum 60S ribosomal protein L23 (BJ171DRAFT_510921), mRNA blastn 1770 185 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
7231294 7231294 PRJNA876641_P_NODE_13086_length_265_cov_0.916667_g13012_i0 PRJNA876641 13086 265 0.916667 2.42916755 Rhizophydium sp. JEL138 139068 Fungi Fungi 228 3.7499999999999994e-55   NTclustered gi|30088555|gb|AY138786.1| 139068 g13012 i0 82.946 97.0075471698113 258 38 96 5 11 265 476 222 Rhizophydium sp. JEL138 alpha-tubulin (atub) gene, partial cds blastn 25707 228 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Rhizophydiaceae Rhizophydium Rhizophydium sp. JEL138
8506253 8506253 PRJNA876641_P_NODE_7027_length_313_cov_2.183333_g6953_i0 PRJNA876641 7027 313 2.183333 6.83383229 Polychytrium aggregatum 110093 Fungi Fungi 154 7.8e-33   NTclustered gi|2432170888|ref|XM_053112523.1| 110093 g6953 i0 80 0.670926517571885 210 40 67 2 2 210 469 677 Polychytrium aggregatum putative 40S ribosomal protein S3 (BJ171DRAFT_522887), mRNA blastn 210 154 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
11056960 11056960 PRJNA876641_P_NODE_2529_length_447_cov_1.689840_g2455_i0 PRJNA876641 2529 447 1.68984 7.5535848 Polychytrium aggregatum 110093 Fungi Fungi 250 1.4299999999999998e-61   NTclustered gi|2432156890|ref|XM_053107738.1| 110093 g2455 i0 78.74 71.4832214765101 381 75 85 6 70 447 71 448 Polychytrium aggregatum 60S ribosomal protein L2 (BJ171DRAFT_425809), partial mRNA blastn 31953 250 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
17431254 17431254 PRJNA876641_P_NODE_12154_length_270_cov_1.172589_g12080_i0 PRJNA876641 12154 270 1.172589 3.1659903 Spizellomyces punctatus 109760 Fungi Fungi 152 2.3699999999999998e-32   NTclustered gi|1026980085|ref|XM_016752373.1| 645134 g12080 i0 83.133 2.62962962962963 166 28 61 0 10 175 346 181 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S15 (SPPG_04127), mRNA blastn 710 152 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
17431507 17431507 PRJNA876641_P_NODE_6454_length_322_cov_1.779116_g6380_i0 PRJNA876641 6454 322 1.779116 5.72875352 Polychytrium aggregatum 110093 Fungi Fungi 185 2.86e-42   NTclustered gi|2432131389|ref|XM_053109302.1| 110093 g6380 i0 78.333 24.6490683229814 300 55 92 8 27 321 105 399 Polychytrium aggregatum ribosomal protein S3Ae (BJ171DRAFT_487525), mRNA blastn 7937 185 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18704692 18704692 PRJNA876641_P_NODE_4795_length_356_cov_4.501767_g4721_i0 PRJNA876641 4795 356 4.501767 16.02629052 Polychytrium aggregatum 110093 Fungi Fungi 145 5.400000000000001e-30   NTclustered gi|2432158676|ref|XM_053113190.1| 110093 g4721 i0 76.866 58.0561797752809 268 54 74 6 1 264 13 276 Polychytrium aggregatum ribosomal protein S25 component of cytosolic 80S ribosome and 40S small subunit (BJ171DRAFT_559057), partial mRNA blastn 20668 145 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;