RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA876641" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA876641 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21255368 21255368 PRJNA876641_P_NODE_6297_length_325_cov_1.119048_g6223_i0 PRJNA876641 6297 325 1.119048 3.636906 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 248 3.63e-61   NTclustered gi|2874254000|emb|OY970325.1| 157466 g6223 i0 80.851 263.713846153846 329 52 99 11 1 324 1304944 1304622 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 85707 248 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
23805450 23805450 PRJNA876641_P_NODE_3419_length_402_cov_1.194529_g3345_i0 PRJNA876641 3419 402 1.194529 4.80200658 Capsulimonas corticalis 2219043 Bacteria Bacteria 255 2.74e-63   NTclustered gi|2240447379|dbj|AP025739.1| 2219043 g3345 i0 82.372 420.890547263682 312 38 77 14 1 309 594427 594130 Capsulimonas corticalis AX-7 DNA, complete genome blastn 169198 255 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;