contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA876641" and tax_clade = "core chlorophytes"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1238489 | 1238489 | PRJNA876641_P_NODE_5021_length_351_cov_2.215827_g4947_i0 | PRJNA876641 | 5021 | 351 | 2.215827 | 7.77755277 | Eukaryota | 2759 | Plants | Plants | 250 | 1.1e-61 | NTclustered | gi|2082260161|ref|XM_001690941.2| | 3055 | g4947 | i0 | 82.414 | 68.997150997151 | 290 | 47 | 82 | 4 | 58 | 345 | 192 | 479 | Chlamydomonas reinhardtii ribosomal protein S23 (CHLRE_12g504200v5), mRNA | blastn | 24218 | 250 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 3403817 | 3403817 | PRJNA876641_P_NODE_12443_length_268_cov_1.425641_g12369_i0 | PRJNA876641 | 12443 | 268 | 1.425641 | 3.82071788 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 71.3 | 6.77e-8 | NTclustered | gi|2082261585|ref|XM_043068686.1| | 3055 | g12369 | i0 | 100 | 0.141791044776119 | 38 | 0 | 14 | 0 | 44 | 81 | 295 | 258 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g537800v5), mRNA | blastn | 38 | 71.3 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 4681465 | 4681465 | PRJNA876641_P_NODE_12444_length_268_cov_1.415385_g12370_i0 | PRJNA876641 | 12444 | 268 | 1.415385 | 3.7932318 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 89.8 | 1.87e-13 | NTclustered | gi|2082253493|ref|XM_043066154.1| | 3055 | g12370 | i0 | 91.045 | 367.347014925373 | 67 | 5 | 25 | 1 | 1 | 67 | 706 | 771 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g405106v5), mRNA | blastn | 98449 | 89.8 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 7231504 | 7231504 | PRJNA876641_P_NODE_5546_length_339_cov_1.492481_g5472_i0 | PRJNA876641 | 5546 | 339 | 1.492481 | 5.05951059 | Monoraphidium neglectum | 145388 | Plants | Plants | 187 | 8.409999999999998e-43 | NTclustered | gi|926783943|ref|XM_014044992.1| | 145388 | g5472 | i0 | 92.969 | 130.194690265487 | 128 | 9 | 38 | 0 | 212 | 339 | 688 | 561 | Monoraphidium neglectum ubiquitin C mRNA | blastn | 44136 | 187 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium neglectum | |
| 8506027 | 8506027 | PRJNA876641_P_NODE_14847_length_255_cov_1.434066_g14773_i0 | PRJNA876641 | 14847 | 255 | 1.434066 | 3.6568683 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 235 | 2.1399999999999997e-57 | NTclustered | gi|2082243702|ref|XM_043061450.1| | 3055 | g14773 | i0 | 84.146 | 83.3686274509804 | 246 | 36 | 96 | 3 | 4 | 249 | 185 | 427 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g204250v5), mRNA | blastn | 21259 | 235 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 8506079 | 8506079 | PRJNA876641_P_NODE_17527_length_249_cov_0.875000_g17453_i0 | PRJNA876641 | 17527 | 249 | 0.875 | 2.17875 | Acetabularia acetabulum | 35845 | Plants | Plants | 180 | 9.91e-41 | NTclustered | gi|1303672|dbj|D50528.1| | 35845 | g17453 | i0 | 80.159 | 10.8192771084337 | 252 | 40 | 99 | 7 | 4 | 249 | 1372 | 1125 | Acetabularia acetabulum mRNA for adenosine triphosphatase A subunit, complete cds | blastn | 2694 | 180 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Dasycladales | Polyphysaceae | Acetabularia | Acetabularia acetabulum | |
| 8506124 | 8506124 | PRJNA876641_P_NODE_20127_length_245_cov_0.895349_g20053_i0 | PRJNA876641 | 20127 | 245 | 0.895349 | 2.19360505 | Auxenochlorella protothecoides | 3075 | Plants | Plants | 154 | 5.89e-33 | NTclustered | gi|760447428|ref|XM_011402481.1| | 3075 | g20053 | i0 | 98.837 | 0.351020408163265 | 86 | 1 | 35 | 0 | 160 | 245 | 1350 | 1265 | Auxenochlorella protothecoides putative dual-specificity RNA methyltransferase RlmN partial mRNA | blastn | 86 | 154 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Auxenochlorella | Auxenochlorella protothecoides | |
| 9780984 | 9780984 | PRJNA876641_P_NODE_13728_length_261_cov_1.494681_g13654_i0 | PRJNA876641 | 13728 | 261 | 1.494681 | 3.90111741 | Chlorella variabilis | 554065 | Plants | Plants | 198 | 2.89e-46 | NTclustered | gi|552833560|ref|XM_005848496.1| | 554065 | g13654 | i0 | 83.182 | 46.9195402298851 | 220 | 34 | 84 | 3 | 42 | 260 | 155 | 372 | Chlorella variabilis hypothetical protein (CHLNCDRAFT_59661) mRNA, complete cds | blastn | 12246 | 198 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella variabilis | |
| 9781178 | 9781178 | PRJNA876641_P_NODE_5968_length_330_cov_2.210117_g5894_i0 | PRJNA876641 | 5968 | 330 | 2.210117 | 7.2933861 | Chlorella variabilis | 554065 | Plants | Plants | 298 | 3.61e-76 | NTclustered | gi|552844675|ref|XM_005851082.1| | 554065 | g5894 | i0 | 85.172 | 85.4060606060606 | 290 | 43 | 88 | 0 | 3 | 292 | 375 | 86 | Chlorella variabilis alpha-tubulin (CHLNCDRAFT_33793) mRNA, complete cds | blastn | 28184 | 298 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella variabilis | |
| 11056995 | 11056995 | PRJNA876641_P_NODE_4329_length_369_cov_1.114865_g4255_i0 | PRJNA876641 | 4329 | 369 | 1.114865 | 4.11385185 | Monoraphidium neglectum | 145388 | Plants | Plants | 198 | 4.26e-46 | NTclustered | gi|926782011|ref|XM_014044026.1| | 145388 | g4255 | i0 | 88.024 | 44.420054200542 | 167 | 20 | 45 | 0 | 201 | 367 | 707 | 541 | Monoraphidium neglectum 14-3-3-like protein mRNA | blastn | 16391 | 198 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium neglectum | |
| 16155991 | 16155991 | PRJNA876641_P_NODE_4713_length_358_cov_2.017544_g4639_i0 | PRJNA876641 | 4713 | 358 | 2.017544 | 7.22280752 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 217 | 1.14e-51 | NTclustered | gi|2082263148|ref|XM_001693658.2| | 3055 | g4639 | i0 | 82.787 | 20.2374301675978 | 244 | 41 | 68 | 1 | 58 | 301 | 493 | 735 | Chlamydomonas reinhardtii ribosomal protein S3a (CHLRE_13g568650v5), mRNA | blastn | 7245 | 217 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 16156018 | 16156018 | PRJNA876641_P_NODE_6453_length_322_cov_1.835341_g6379_i0 | PRJNA876641 | 6453 | 322 | 1.835341 | 5.90979802 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 163 | 1.34e-35 | NTclustered | gi|2082238114|ref|XM_001701583.2| | 3055 | g6379 | i0 | 79.825 | 1.29192546583851 | 228 | 42 | 70 | 4 | 93 | 318 | 621 | 396 | Chlamydomonas reinhardtii ribosomal protein L19 (CHLRE_02g075700v5), mRNA | blastn | 416 | 163 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 17431283 | 17431283 | PRJNA876641_P_NODE_14094_length_259_cov_1.424731_g14020_i0 | PRJNA876641 | 14094 | 259 | 1.424731 | 3.69005329 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 182 | 2.88e-41 | NTclustered | gi|2082244743|ref|XM_001698671.2| | 3055 | g14020 | i0 | 93.443 | 48.7220077220077 | 122 | 8 | 47 | 0 | 130 | 251 | 750 | 629 | Chlamydomonas reinhardtii ribosomal protein L23 (CHLRE_04g211800v5), mRNA | blastn | 12619 | 182 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 18704494 | 18704494 | PRJNA876641_P_NODE_12915_length_265_cov_2.406250_g12841_i0 | PRJNA876641 | 12915 | 265 | 2.40625 | 6.3765625 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 145 | 3.88e-30 | NTclustered | gi|2082256028|ref|XM_001702556.2| | 3055 | g12841 | i0 | 80 | 1.97735849056604 | 195 | 39 | 74 | 0 | 26 | 220 | 218 | 412 | Chlamydomonas reinhardtii ribosomal protein L30 (CHLRE_10g420750v5), mRNA | blastn | 524 | 145 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 21640565 | 21640565 | PRJNA876641_P_NODE_2077_length_483_cov_1.060976_g2003_i0 | PRJNA876641 | 2077 | 483 | 1.060976 | 5.12451408 | Eukaryota | 2759 | Plants | Plants | 372 | 3.18e-98 | NTclustered | gi|2082253475|ref|XM_001695212.2| | 3055 | g2003 | i0 | 80.894 | 87.7577639751553 | 492 | 76 | 100 | 14 | 1 | 483 | 2205 | 1723 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g386750v5), mRNA | blastn | 42387 | 374 | 0.994652406417112 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 22916143 | 22916143 | PRJNA876641_P_NODE_1978_length_494_cov_1.415677_g1904_i0 | PRJNA876641 | 1978 | 494 | 1.415677 | 6.99344438 | Eukaryota | 2759 | Plants | Plants | 56.5 | 0.004 | NTclustered | gi|926763293|ref|XM_014035245.1| | 145388 | g1904 | i0 | 90.909 | 0.477732793522267 | 44 | 1 | 8 | 1 | 393 | 433 | 1244 | 1201 | Monoraphidium neglectum E3 ubiquitin-protein ligase mRNA | blastn | 236 | 56.5 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium neglectum | |
| 23805285 | 23805285 | PRJNA876641_P_NODE_13579_length_262_cov_1.402116_g13505_i0 | PRJNA876641 | 13579 | 262 | 1.402116 | 3.67354392 | Auxenochlorella protothecoides | 3075 | Plants | Plants | 193 | 1.35e-44 | NTclustered | gi|760442850|ref|XM_011400192.1| | 3075 | g13505 | i0 | 95.798 | 0.454198473282443 | 119 | 5 | 45 | 0 | 1 | 119 | 408 | 526 | Auxenochlorella protothecoides hypothetical protein partial mRNA | blastn | 119 | 193 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Auxenochlorella | Auxenochlorella protothecoides | |
| 23805507 | 23805507 | PRJNA876641_P_NODE_6139_length_327_cov_1.669291_g6065_i0 | PRJNA876641 | 6139 | 327 | 1.669291 | 5.45858157 | Monoraphidium neglectum | 145388 | Plants | Plants | 298 | 3.58e-76 | NTclustered | gi|926779051|ref|XM_014042546.1| | 145388 | g6065 | i0 | 84.899 | 88.2599388379205 | 298 | 41 | 91 | 3 | 16 | 311 | 1280 | 985 | Monoraphidium neglectum heat shock 70kDa protein 1/8 mRNA | blastn | 28861 | 298 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium neglectum | |
| 25079239 | 25079239 | PRJNA876641_P_NODE_18760_length_247_cov_0.885057_g18686_i0 | PRJNA876641 | 18760 | 247 | 0.885057 | 2.18609079 | Coccomyxa subellipsoidea | 248742 | Plants | Plants | 246 | 9.54e-61 | NTclustered | gi|545355299|ref|XM_005643394.1| | 574566 | g18686 | i0 | 84.677 | 1.00404858299595 | 248 | 36 | 100 | 2 | 1 | 247 | 374 | 620 | Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA | blastn | 248 | 246 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa subellipsoidea | ||
| 25079252 | 25079252 | PRJNA876641_P_NODE_19600_length_246_cov_0.890173_g19526_i0 | PRJNA876641 | 19600 | 246 | 0.890173 | 2.18982558 | Auxenochlorella protothecoides | 3075 | Plants | Plants | 455 | 1.4500000000000002e-123 | NTclustered | gi|760443184|ref|XM_011400359.1| | 3075 | g19526 | i0 | 100 | 1 | 246 | 0 | 100 | 0 | 1 | 246 | 653 | 408 | Auxenochlorella protothecoides Translation initiation factor eIF-2B subunit beta partial mRNA | blastn | 246 | 455 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Auxenochlorella | Auxenochlorella protothecoides |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;