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contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJNA876641" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 25 ✖

bioproject 1

  • PRJNA876641 · 25 ✖

analysis 1

  • blastn · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
853138 853138 PRJNA876641_P_NODE_13681_length_261_cov_1.760638_g13607_i0 PRJNA876641 13681 261 1.760638 4.59526518 Cochliopodium spiniferum 313558 Discosea other_Eukaryota 394 3.429999999999999e-105   NTclustered gi|330902897|gb|JF298273.1| 313558 g13607 i0 94.186 95.4329501915709 258 15 99 0 1 258 276 533 Cochliopodium spiniferum clone 5102 actin gene, partial cds blastn 24908 394 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium spiniferum
2128632 2128632 PRJNA876641_P_NODE_5462_length_341_cov_1.611940_g5388_i0 PRJNA876641 5462 341 1.61194 5.4967154 Physarum polycephalum 5791 Evosea other_Eukaryota 359 1.7e-94   NTclustered gi|156151273|dbj|AB300196.1| 5791 g5388 i0 85.673 95.9237536656891 342 47 100 2 1 341 1282 942 Physarum polycephalum hsp90 mRNA for heat shock protein 90, partial cds blastn 32710 359 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
3403789 3403789 PRJNA876641_P_NODE_10743_length_278_cov_1.209756_g10669_i0 PRJNA876641 10743 278 1.209756 3.36312168 Dictyostelium discoideum 44689 Evosea other_Eukaryota 143 1.48e-29   NTclustered gi|66805324|ref|XM_631303.1| 352472 g10669 i0 79.897 0.697841726618705 194 39 70 0 1 194 1342 1535 Dictyostelium discoideum AX4 methylmalonate-semialdehyde dehydrogenase (mmsdh) mRNA, complete cds blastn 194 143 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
3403821 3403821 PRJNA876641_P_NODE_1263_length_590_cov_16.524178_g1190_i0 PRJNA876641 1263 590 16.524178 97.4926502 Platyamoeba placida 3454475 Discosea other_Eukaryota 688 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g1190 i0 87.755 98.7271186440678 588 72 99 0 1 588 484 1071 Platyamoeba placida actin mRNA, partial cds blastn 58249 688 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
3404094 3404094 PRJNA876641_P_NODE_6423_length_323_cov_1.232000_g6349_i0 PRJNA876641 6423 323 1.232 3.97936 Entamoeba invadens 33085 Evosea other_Eukaryota 62.1 5.04e-5   NTclustered gi|511091352|dbj|AK423018.1| 33085 g6349 i0 78.723 10.4984520123839 94 18 29 2 147 239 857 765 Entamoeba invadens cDNA clone: Xei-008C04, hypothetical protein, complete cds, strain: IP1 blastn 3391 62.1 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
4681571 4681571 PRJNA876641_P_NODE_2004_length_490_cov_5.441247_g1930_i0 PRJNA876641 2004 490 5.441247 26.6621103 Vannella sp. strain W181G/I 325084 Discosea other_Eukaryota 682 0   NTclustered gi|62865938|gb|AY929913.1| 325084 g1930 i0 96.618 100.687755102041 414 9 99 4 81 490 1229 1641 Vannella sp. strain W181G/I 18S small subunit ribosomal RNA gene, partial sequence blastn 49337 682 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain W181G/I
7231236 7231236 PRJNA876641_P_NODE_1006_length_647_cov_2.620209_g935_i0 PRJNA876641 1006 647 2.620209 16.95275223 Lamproderma scintillans 1115720 Evosea other_Eukaryota 603 1.4199999999999997e-167   NTclustered gi|2306687671|gb|MZ234285.1| 1115720 g935 i0 83.614 98.6800618238022 653 95 100 11 1 647 658 12 Lamproderma scintillans voucher LE284950 translation elongation factor EF-1 alpha (EF1A) gene, partial cds blastn 63846 603 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Lamproderma Lamproderma scintillans
7616494 7616494 PRJNA876641_P_NODE_3806_length_386_cov_2.552716_g3732_i0 PRJNA876641 3806 386 2.552716 9.85348376 Physariida 5789 Evosea other_Eukaryota 459 1.86e-124   NTclustered gi|161207|gb|M21500.1|SLMACT35 5791 g3732 i0 88.083 98.8886010362694 386 46 100 0 1 386 932 547 P.polycephalum actin (Ppa35) mRNA, complete cds blastn 38171 460 0.997826086956522 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
8506091 8506091 PRJNA876641_P_NODE_18287_length_248_cov_0.880000_g18213_i0 PRJNA876641 18287 248 0.88 2.1824 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 193 1.27e-44   NTclustered gi|88601113|gb|DQ390343.1| 5755 g18213 i0 84.694 0.790322580645161 196 26 78 3 19 211 451 645 Acanthamoeba castellanii sterol C-24 reductase-like protein mRNA, partial cds blastn 196 193 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8506176 8506176 PRJNA876641_P_NODE_23547_length_241_cov_0.916667_g23473_i0 PRJNA876641 23547 241 0.916667 2.20916747 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 265 2.5599999999999996e-66   NTclustered gi|470412384|ref|XM_004336417.1| 1257118 g23473 i0 87.946 92.6473029045643 224 27 93 0 2 225 971 748 Acanthamoeba castellanii str. Neff phosphoenolpyruvate carboxykinase (GTP), putative (ACA1_191500), partial mRNA blastn 22328 265 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9781134 9781134 PRJNA876641_P_NODE_2848_length_429_cov_1.941011_g2774_i0 PRJNA876641 2848 429 1.941011 8.32693719 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 1.06e-57   NTclustered gi|470467440|ref|XM_004341747.1| 1257118 g2774 i0 77.778 2.58974358974359 387 84 90 2 3 388 404 19 Acanthamoeba castellanii str. Neff guanine nucleotide-binding protein beta subunit, putative (ACA1_199990), partial mRNA blastn 1111 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9781224 9781224 PRJNA876641_P_NODE_9148_length_287_cov_1.238318_g9074_i0 PRJNA876641 9148 287 1.238318 3.55397266 Physarum polycephalum 5791 Evosea other_Eukaryota 276 1.45e-69   NTclustered gi|161220|gb|M58521.1|SLMBETA 5791 g9074 i0 84.342 91.6759581881533 281 44 98 0 1 281 420 700 P.polycephalum beta-tubulin-1 (betA) mRNA, 5' end blastn 26311 276 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
11056743 11056743 PRJNA876641_P_NODE_10189_length_281_cov_1.278846_g10115_i0 PRJNA876641 10189 281 1.278846 3.59355726 Heterostelium album 2086695 Evosea other_Eukaryota 230 1.1199999999999998e-55   NTclustered gi|1160553732|ref|XM_020572691.1| 670386 g10115 i0 85.845 90.6975088967972 219 28 77 3 20 236 909 692 Polysphondylium pallidum PN500 elongation factor 1 alpha (efaAI), partial mRNA blastn 25486 230 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
11056814 11056814 PRJNA876641_P_NODE_14749_length_255_cov_2.175824_g14675_i0 PRJNA876641 14749 255 2.175824 5.5483512 Physarum polycephalum 5791 Evosea other_Eukaryota 187 6.089999999999998e-43   NTclustered gi|119552593|gb|EF140724.1| 5791 g14675 i0 80.237 14.2313725490196 253 47 98 3 1 251 187 438 Physarum polycephalum 14-3-3-like protein mRNA, complete cds blastn 3629 187 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
11056818 11056818 PRJNA876641_P_NODE_149_length_1318_cov_6.967871_g95_i1 PRJNA876641 149 1318 6.967871 91.83653978 Dictyostelium purpureum 5786 Evosea other_Eukaryota 656 0   NTclustered gi|330792727|ref|XM_003284391.1| 5786 g95 i1 77.066 43.931714719271604 1186 243 89 24 2 1168 178 1353 Dictyostelium purpureum elongation factor 1 alpha (DICPUDRAFT_52946), mRNA blastn 57902 656 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
12332331 12332331 PRJNA876641_P_NODE_230_length_1126_cov_1.975309_g191_i0 PRJNA876641 230 1126 1.975309 22.24197934 Acytostelium subglobosum 361139 Evosea other_Eukaryota 575 5.499999999999998e-159   NTclustered gi|831784126|ref|XM_012901914.1| 1410327 g191 i0 77.515 66.1634103019538 1014 190 88 29 132 1121 1290 291 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 74500 575 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
12718067 12718067 PRJNA876641_P_NODE_24210_length_212_cov_2.712230_g24136_i0 PRJNA876641 24210 212 2.71223 5.7499276 Vannellidae 95227 Discosea other_Eukaryota 195 2.9299999999999997e-45   NTclustered gi|62865939|gb|AY929914.1| 325077 g24136 i0 95.868 51.561320754717 121 3 56 2 47 165 1227 1347 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 10931 196 0.994897959183674 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
12718081 12718081 PRJNA876641_P_NODE_6130_length_327_cov_1.834646_g6056_i0 PRJNA876641 6130 327 1.834646 5.99929242 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 241 6.11e-59   NTclustered gi|290048|gb|L11589.1|DDIRACIB 44689 g6056 i0 84.49 63.0795107033639 245 36 75 2 7 250 248 5 Slime mold Rac1B protein mRNA, complete cds blastn 20627 243 0.991769547325103 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
18704683 18704683 PRJNA876641_P_NODE_4075_length_377_cov_1.276316_g4001_i0 PRJNA876641 4075 377 1.276316 4.81171132 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 150 1.2399999999999998e-31   NTclustered gi|470436786|ref|XM_004338880.1| 1257118 g4001 i0 81.538 5.44031830238727 195 25 50 8 79 267 1414 1603 Acanthamoeba castellanii str. Neff long chain acylcoA synthetase (ACA1_043260), partial mRNA blastn 2051 150 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18704725 18704725 PRJNA876641_P_NODE_6395_length_323_cov_1.732000_g6321_i0 PRJNA876641 6395 323 1.732 5.59436 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 213 1.31e-50   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g6321 i0 80.727 85.3529411764706 275 52 85 1 48 321 422 148 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 27569 213 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18704747 18704747 PRJNA876641_P_NODE_7635_length_304_cov_0.813853_g7561_i0 PRJNA876641 7635 304 0.813853 2.47411312 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 196 1.24e-45   NTclustered gi|470486807|ref|XM_004344593.1| 1257118 g7561 i0 80.709 2.45723684210526 254 47 83 2 13 265 66 318 Acanthamoeba castellanii str. Neff MC family transporter: phosphate, putative (ACA1_278610), partial mRNA blastn 747 196 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19979730 19979730 PRJNA876641_P_NODE_1136_length_615_cov_1.667897_g1064_i0 PRJNA876641 1136 615 1.667897 10.25756655 Dictyostelium purpureum 5786 Evosea other_Eukaryota 422 4.03e-113   NTclustered gi|330801204|ref|XM_003288572.1| 5786 g1064 i0 83.226 51.9658536585366 465 73 75 4 1 462 61 523 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_92126), mRNA blastn 31959 422 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
20364769 20364769 PRJNA876641_P_NODE_12436_length_268_cov_1.461538_g12362_i0 PRJNA876641 12436 268 1.461538 3.91692184 Dictyostelium 5782 Evosea other_Eukaryota 235 2.27e-57   NTclustered gi|2274919|emb|AJ000063.1| 44689 g12362 i0 85.909 18.9141791044776 220 31 82 0 1 220 324 105 Dictyostelium discoideum mRNA for ADP-ribosylation factor 1 blastn 5069 235 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
20364796 20364796 PRJNA876641_P_NODE_19436_length_246_cov_0.890173_g19362_i0 PRJNA876641 19436 246 0.890173 2.18982558 Dictyostelium 5782 Evosea other_Eukaryota 132 2.77e-26   NTclustered gi|433874|emb|X75263.1| 44689 g19362 i0 87.611 14.9471544715447 113 14 46 0 134 246 323 211 D.discoideum (AX3) mRNA for heat shock cognate protein (hsc70) blastn 3677 132 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
25079138 25079138 PRJNA876641_P_NODE_12020_length_270_cov_2.106599_g11946_i0 PRJNA876641 12020 270 2.106599 5.6878173 Vannella septentrionalis 197531 Discosea other_Eukaryota 468 2.07e-127   NTclustered gi|300078499|gb|GU001161.1| 197531 g11946 i0 97.802 69.7851851851852 273 3 100 1 1 270 2635 2907 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18842 468 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;