RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA874604" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA874604 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5955304 5955304 PRJNA874604_P_NODE_49325_length_285_cov_1.816038_g48973_i0 PRJNA874604 49325 285 1.816038 5.1757083 Linderina pennispora 61395 Fungi Fungi 174 5.39e-39   NTclustered gi|2028321822|ref|XM_040887850.1| 61395 g48973 i0 87.838 51.7789473684211 148 18 52 0 137 284 511 658 Linderina pennispora peptidyl-prolyl cis-trans isomerase A1 (DL89DRAFT_268255), mRNA blastn 14757 174 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
12717626 12717626 PRJNA874604_P_NODE_53730_length_277_cov_1.509804_g53378_i0 PRJNA874604 53730 277 1.509804 4.18215708 Fungi 4751 Fungi Fungi 111 4.15e-20   NTclustered gi|2324002808|ref|XM_051532647.1| 61397 g53378 i0 81.119 1.65703971119134 143 23 51 3 123 263 141 1 Kickxella alabastrina ribosomal L29e protein family-domain-containing protein (BX661DRAFT_135011), partial mRNA blastn 459 111 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
16155036 16155036 PRJNA874604_P_NODE_68093_length_251_cov_2.455056_g67741_i0 PRJNA874604 68093 251 2.455056 6.16219056 Linderina pennispora 61395 Fungi Fungi 202 2.13e-47   NTclustered gi|2028322926|ref|XM_040888010.1| 61395 g67741 i0 81.452 77.3426294820717 248 44 98 2 5 251 889 643 Linderina pennispora 60S ribosomal protein L10-A (DL89DRAFT_268696), partial mRNA blastn 19413 202 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;