RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA874604" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA874604 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9779582 9779582 PRJNA874604_P_NODE_34828_length_326_cov_1.189723_g34476_i0 PRJNA874604 34828 326 1.189723 3.87849698 Anaerohalosphaeraceae bacterium 2873829 Bacteria Bacteria 60.2 1.83e-4   NTclustered gi|2621717560|emb|OY775912.1| 2873829 g34476 i0 92.857 5.66564417177914 42 2 13 1 199 239 901799 901840 MAG: Anaerohalosphaeraceae bacterium isolate 978f9c3d-91dc-4e11-95ec-8fa255ba7f00 genome assembly, chromosome: 1 blastn 1847 60.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Sedimentisphaerales Anaerohalosphaeraceae   Anaerohalosphaeraceae bacterium
25079007 25079007 PRJNA874604_P_NODE_95420_length_242_cov_0.911243_g95068_i0 PRJNA874604 95420 242 0.911243 2.20520806 Phycisphaeraceae bacterium 2026777 Bacteria Bacteria 141 4.52e-29   NTclustered gi|2076441902|gb|CP075368.1| 2026777 g95068 i0 78.205 9.27272727272727 234 42 94 8 12 239 3427749 3427519 MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome blastn 2244 141 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae   Phycisphaeraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;