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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA874604" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA874604 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
852357 852357 PRJNA874604_P_NODE_67041_length_253_cov_1.711111_g66689_i0 PRJNA874604 67041 253 1.711111 4.32911083 Dreissena polymorpha 45954 Mollusca Mollusca 52.8 0.023   NTclustered gi|2364408267|ref|XM_052412948.1| 45954 g66689 i0 100 0.110671936758893 28 0 11 0 225 252 795 768 PREDICTED: Dreissena polymorpha transcriptional repressor NF-X1 homolog (LOC127870315), transcript variant X1, mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
2127206 2127206 PRJNA874604_P_NODE_43482_length_299_cov_1.362832_g43130_i0 PRJNA874604 43482 299 1.362832 4.07486768 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.008   NTclustered gi|2913001038|dbj|AP039608.1| 145626 g43130 i0 94.286 1.94314381270903 35 2 12 0 103 137 37320319 37320285 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 27, sequence blastn 581 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
4680893 4680893 PRJNA874604_P_NODE_76444_length_249_cov_0.875000_g76092_i0 PRJNA874604 76444 249 0.875 2.17875 Ostrea edulis 37623 Mollusca Mollusca 65.8 2.89e-6   NTclustered gi|2507363288|ref|XM_056156756.1| 37623 g76092 i0 86.441 0.236947791164659 59 8 24 0 79 137 935 993 PREDICTED: Ostrea edulis electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial-like (LOC130052284), mRNA blastn 59 65.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Ostrea Ostrea edulis
18704211 18704211 PRJNA874604_P_NODE_88055_length_245_cov_0.895349_g87703_i0 PRJNA874604 88055 245 0.895349 2.19360505 Mya arenaria 6604 Mollusca Mollusca 52.8 0.022   NTclustered gi|2427429652|ref|XM_052931571.1| 6604 g87703 i0 100 0.228571428571429 28 0 11 0 57 84 3637 3664 PREDICTED: Mya arenaria uncharacterized LOC128222524 (LOC128222524), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
19979523 19979523 PRJNA874604_P_NODE_91236_length_244_cov_0.900585_g90884_i0 PRJNA874604 91236 244 0.900585 2.1974274 Haliotis cracherodii 6455 Mollusca Mollusca 110 1.29e-19   NTclustered gi|2911902698|ref|XM_071229455.1| 6455 g90884 i0 89.011 1.74180327868852 91 6 41 2 147 237 1769 1683 PREDICTED: Haliotis cracherodii ribonuclease H2 subunit B-like (LOC139447952), mRNA blastn 425 110 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis cracherodii
22528486 22528486 PRJNA874604_P_NODE_37298_length_317_cov_2.627049_g36946_i0 PRJNA874604 37298 317 2.627049 8.32774533 Gigantopelta aegis 1735272 Mollusca Mollusca 165 3.66e-36   NTclustered gi|2034297354|ref|XM_041509936.1| 1735272 g36946 i0 80.556 19.6403785488959 216 40 68 2 17 231 501 287 PREDICTED: Gigantopelta aegis 40S ribosomal protein S15-like (LOC121380905), mRNA blastn 6226 165 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
22915733 22915733 PRJNA874604_P_NODE_51398_length_281_cov_2.177885_g51046_i0 PRJNA874604 51398 281 2.177885 6.11985685 Mytilus 6548 Mollusca Mollusca 255 1.84e-63   NTclustered gi|2334628002|ref|XM_052218587.1| 6549 g51046 i0 83.513 87.0889679715303 279 40 98 6 1 276 247 522 PREDICTED: Mytilus californianus tubulin alpha-1A chain-like (LOC127712254), mRNA blastn 24472 257 0.992217898832685 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
22915893 22915893 PRJNA874604_P_NODE_72678_length_250_cov_0.870056_g72326_i0 PRJNA874604 72678 250 0.870056 2.17514 Metazoa 33208 Mollusca Mollusca 52.8 0.023   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g72326 i0 100 0.896 28 0 11 0 37 64 9599993 9599966 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 224 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
24189328 24189328 PRJNA874604_P_NODE_25459_length_367_cov_1.047619_g25107_i0 PRJNA874604 25459 367 1.047619 3.84476173 Metazoa 33208 Mollusca Mollusca 678 0   NTclustered gi|1928112764|gb|MT947788.1| 6523 g25107 i0 100 99.9809264305177 367 0 100 0 1 367 94 460 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 36693 678 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;