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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA874604" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA874604 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
851700 851700 PRJNA874604_P_NODE_31541_length_338_cov_1.452830_g31189_i0 PRJNA874604 31541 338 1.45283 4.9105654 Polychytrium aggregatum 110093 Fungi Fungi 143 1.84e-29   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g31189 i0 77.037 7.11834319526627 270 49 78 9 17 281 1201 940 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 2406 143 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9779264 9779264 PRJNA874604_P_NODE_16928_length_431_cov_1.472067_g16576_i0 PRJNA874604 16928 431 1.472067 6.34460877 Polychytrium aggregatum 110093 Fungi Fungi 233 1.3799999999999998e-56   NTclustered gi|2432171462|ref|XM_053112561.1| 110093 g16576 i0 80.259 65.8167053364269 309 61 72 0 69 377 2146 1838 Polychytrium aggregatum heat shock protein 90 kDa (BJ171DRAFT_524257), mRNA blastn 28367 233 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9780048 9780048 PRJNA874604_P_NODE_58488_length_268_cov_6.307692_g58136_i0 PRJNA874604 58488 268 6.307692 16.90461456 Polychytrium aggregatum 110093 Fungi Fungi 119 2.39e-22   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g58136 i0 84.127 7.27611940298507 126 16 46 3 145 268 148 25 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 1950 119 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
11055177 11055177 PRJNA874604_P_NODE_18549_length_415_cov_1.801170_g18197_i0 PRJNA874604 18549 415 1.80117 7.4748555 Spizellomyces punctatus 109760 Fungi Fungi 285 3.61e-72   NTclustered gi|1026960458|ref|XM_016750701.1| 645134 g18197 i0 79.187 67.0313253012048 418 81 100 6 1 415 1082 668 Spizellomyces punctatus DAOM BR117 aconitate hydratase, mitochondrial (SPPG_02410), partial mRNA blastn 27818 285 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
12331313 12331313 PRJNA874604_P_NODE_6050_length_665_cov_1.913851_g5722_i0 PRJNA874604 6050 665 1.913851 12.72710915 Fimicolochytrium jonesii 1396493 Fungi Fungi 418 5.669999999999999e-112   NTclustered gi|2432080769|ref|XM_053070516.1| 1396493 g5722 i0 79.542 90.8902255639098 611 106 90 14 66 665 1050 448 Fimicolochytrium jonesii mitochondrial carrier domain-containing protein (EV422DRAFT_532223), mRNA blastn 60442 418 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
12331322 12331322 PRJNA874604_P_NODE_60870_length_264_cov_1.821990_g60518_i0 PRJNA874604 60870 264 1.82199 4.8100536 Gaertneriomyces semiglobifer 109897 Fungi Fungi 283 7.859999999999999e-72   NTclustered gi|358030867|dbj|AB609167.1| 109897 g60518 i0 85.985 98.0416666666667 264 37 100 0 1 264 1206 1469 Gaertneriomyces semiglobifer EF2 gene for translation elongation factor 2, partial cds, strain: BL035 blastn 25883 283 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gaertneriomyces Gaertneriomyces semiglobifer
12331703 12331703 PRJNA874604_P_NODE_79870_length_247_cov_2.206897_g79518_i0 PRJNA874604 79870 247 2.206897 5.45103559 Synchytrium microbalum 1806994 Fungi Fungi 161 3.56e-35   NTclustered gi|1759153772|ref|XM_031169698.1| 1806994 g79518 i0 78.838 3.78137651821862 241 49 97 2 2 241 577 816 Synchytrium microbalum uncharacterized protein (SmJEL517_g03770), partial mRNA blastn 934 161 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
14879348 14879348 PRJNA874604_P_NODE_12212_length_495_cov_2.056872_g11861_i0 PRJNA874604 12212 495 2.056872 10.1815164 Polychytrium aggregatum 110093 Fungi Fungi 200 1.63e-46   NTclustered gi|2432162630|ref|XM_053112000.1| 110093 g11861 i0 76.485 28.1272727272727 404 73 80 16 24 419 523 134 Polychytrium aggregatum ribosomal protein L22/L17 (BJ171DRAFT_515986), mRNA blastn 13923 200 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
16154078 16154078 PRJNA874604_P_NODE_16973_length_430_cov_2.764706_g16621_i0 PRJNA874604 16973 430 2.764706 11.8882358 Spizellomyces punctatus 109760 Fungi Fungi 204 1.0799999999999999e-47   NTclustered gi|1026980085|ref|XM_016752373.1| 645134 g16621 i0 81.423 3.09302325581395 253 44 59 3 179 430 181 431 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S15 (SPPG_04127), mRNA blastn 1330 204 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
23804910 23804910 PRJNA874604_P_NODE_8479_length_579_cov_2.363636_g8136_i0 PRJNA874604 8479 579 2.363636 13.68545244 Polychytrium aggregatum 110093 Fungi Fungi 366 1.7999999999999996e-96   NTclustered gi|2432129870|ref|XM_053107267.1| 110093 g8136 i0 82.005 63.5284974093264 439 71 75 8 139 573 236 670 Polychytrium aggregatum ribosomal protein S7 domain-containing protein (BJ171DRAFT_4084), mRNA blastn 36783 366 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;