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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA874604" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA874604 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
852345 852345 PRJNA874604_P_NODE_66501_length_254_cov_1.701657_g66149_i0 PRJNA874604 66501 254 1.701657 4.32220878 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 451 1.95e-122   NTclustered gi|88792583|gb|DQ386164.1| 372086 g66149 i0 98.814 94.7244094488189 253 3 99 0 2 254 1913 1661 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 24060 451 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
2126995 2126995 PRJNA874604_P_NODE_31202_length_339_cov_2.454887_g30850_i0 PRJNA874604 31202 339 2.454887 8.32206693 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 355 2.18e-93   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g30850 i0 86.297 59.5073746312684 343 27 100 11 1 339 3984 3658 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 20173 355 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
2127556 2127556 PRJNA874604_P_NODE_61562_length_263_cov_1.568421_g61210_i0 PRJNA874604 61562 263 1.568421 4.12494723 Sandona mutans 563755 SAR_Eukaryotes SAR_Eukaryotes 117 8.39e-22   NTclustered gi|224996445|gb|FJ654277.1| 563755 g61210 i0 100 0.346007604562738 63 0 24 0 201 263 302 240 Cercozoa sp. ATCC50314p145at3 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 91 117 1 Eukaryota Sar   Cercozoa   Glissomonadida Sandonidae Sandona Sandona mutans
9779761 9779761 PRJNA874604_P_NODE_43728_length_298_cov_2.360000_g43376_i0 PRJNA874604 43728 298 2.36 7.0328 Paulinella chromatophora 39717 SAR_Eukaryotes SAR_Eukaryotes 283 9.02e-72   NTclustered gi|224549833|gb|FJ456915.1| 39717 g43376 i0 83.838 70.6073825503356 297 48 99 0 2 298 563 859 Paulinella chromatophora strain FK01 actin gene, partial cds blastn 21041 283 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
9780278 9780278 PRJNA874604_P_NODE_70248_length_251_cov_0.865169_g69896_i0 PRJNA874604 70248 251 0.865169 2.17157419 Paulinella chromatophora 39717 SAR_Eukaryotes SAR_Eukaryotes 257 4.49e-64   NTclustered gi|224549833|gb|FJ456915.1| 39717 g69896 i0 85.2 89 250 37 99 0 2 251 520 769 Paulinella chromatophora strain FK01 actin gene, partial cds blastn 22339 257 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
12330836 12330836 PRJNA874604_P_NODE_34870_length_326_cov_0.980237_g34518_i0 PRJNA874604 34870 326 0.980237 3.19557262 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 597 3.139999999999999e-166   NTclustered gi|300676732|gb|GQ377662.1| 188950 g34518 i0 99.693 24.0521472392638 326 1 100 0 1 326 575 250 Bodomorpha minima alpha-tubulin (Atub) gene, partial cds blastn 7841 597 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
13605089 13605089 PRJNA874604_P_NODE_18631_length_414_cov_2.331378_g18279_i0 PRJNA874604 18631 414 2.331378 9.65190492 Cercomonas sp. ATCC 50316 45110 SAR_Eukaryotes SAR_Eukaryotes 298 4.63e-76   NTclustered gi|27734378|gb|AY099144.1| 45110 g18279 i0 91.284 93.6328502415459 218 19 53 0 63 280 209 426 Cercomonas ATCC50316 isolate pub6 polyubiquitin gene, partial cds blastn 38764 298 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. ATCC 50316
13605165 13605165 PRJNA874604_P_NODE_22571_length_384_cov_2.254019_g22219_i0 PRJNA874604 22571 384 2.254019 8.65543296 Paracercomonas sp. 1979800 SAR_Eukaryotes SAR_Eukaryotes 710 0   NTclustered gi|1326162414|gb|MG775634.1| 1979800 g22219 i0 100 93.9453125 384 0 100 0 1 384 612 995 Paracercomonas sp. strain SF61_P_Poa small subunit ribosomal RNA gene, partial sequence blastn 36075 710 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas sp.
19978110 19978110 PRJNA874604_P_NODE_20916_length_396_cov_2.021672_g20564_i0 PRJNA874604 20916 396 2.021672 8.00582112 Cercomonas sp. HFCC53 458867 SAR_Eukaryotes SAR_Eukaryotes 693 0   NTclustered gi|161015705|gb|EF681939.1| 458867 g20564 i0 99.735 33.5833333333333 378 1 95 0 19 396 597 220 Cercomonas sp. HFCC53 28S ribosomal RNA gene, partial sequence blastn 13299 693 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC53
19979027 19979027 PRJNA874604_P_NODE_66516_length_254_cov_1.701657_g66164_i0 PRJNA874604 66516 254 1.701657 4.32220878 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 464 2.4999999999999994e-126   NTclustered gi|1402550486|gb|MH488772.1| 2231170 g66164 i0 99.606 7.2992125984252 254 1 100 0 1 254 34 287 Guttulinopsis rogosa isolate T1 small subunit ribosomal RNA gene, partial sequence blastn 1854 464 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;