contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA874604" and tax_clade = "Amoebozoa"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2126784 | 2126784 | PRJNA874604_P_NODE_17542_length_425_cov_1.161932_g17190_i0 | PRJNA874604 | 17542 | 425 | 1.161932 | 4.938211 | Dictyostelium purpureum | 5786 | Evosea | other_Eukaryota | 292 | 2.22e-74 | NTclustered | gi|330818907|ref|XM_003291484.1| | 5786 | g17190 | i0 | 80.253 | 11.4235294117647 | 395 | 72 | 92 | 5 | 5 | 396 | 24 | 415 | Dictyostelium purpureum ribosomal protein L10E (DICPUDRAFT_92700), mRNA | blastn | 4855 | 292 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium purpureum | ||
| 2513262 | 2513262 | PRJNA874604_P_NODE_16002_length_441_cov_9.701087_g15650_i0 | PRJNA874604 | 16002 | 441 | 9.701087 | 42.78179367 | Ripella | 1217112 | Discosea | other_Eukaryota | 693 | 0 | NTclustered | gi|1269228437|gb|MF683562.1| | 2047822 | g15650 | i0 | 95.034 | 100.433106575964 | 443 | 18 | 100 | 4 | 1 | 441 | 1044 | 604 | Ripella decalvata clone 15101 18S ribosomal RNA gene, partial sequence | blastn | 44291 | 695 | 0.997122302158273 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Ripella | Ripella decalvata | |||
| 4679829 | 4679829 | PRJNA874604_P_NODE_1784_length_1117_cov_3.204981_g1576_i0 | PRJNA874604 | 1784 | 1117 | 3.204981 | 35.79963777 | Paramoeba branchiphila | 308475 | Discosea | other_Eukaryota | 1144 | 0 | NTclustered | gi|226347442|gb|FJ807261.1| | 308475 | g1576 | i0 | 87.238 | 67.2202327663384 | 1003 | 126 | 90 | 2 | 116 | 1117 | 1202 | 201 | Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds | blastn | 75085 | 1144 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Dactylopodida | Paramoebidae | Paramoeba | Paramoeba branchiphila | ||
| 7230186 | 7230186 | PRJNA874604_P_NODE_49466_length_285_cov_1.433962_g49114_i0 | PRJNA874604 | 49466 | 285 | 1.433962 | 4.0867917 | Paramoeba perurans | 437603 | Discosea | other_Eukaryota | 172 | 1.94e-38 | NTclustered | gi|145386784|gb|EF216909.1| | 437603 | g49114 | i0 | 77.855 | 27.8315789473684 | 289 | 57 | 100 | 7 | 1 | 285 | 45 | 330 | Neoparamoeba perurans strain GD-HAC/1 28S large subunit ribosomal RNA gene, partial sequence | blastn | 7932 | 172 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Dactylopodida | Paramoebidae | Paramoeba | Paramoeba perurans | ||
| 9779187 | 9779187 | PRJNA874604_P_NODE_11008_length_517_cov_7.601351_g10657_i0 | PRJNA874604 | 11008 | 517 | 7.601351 | 39.29898467 | Vannella sp. KDN1 | 2081467 | Discosea | other_Eukaryota | 813 | 0 | NTclustered | gi|1770511914|dbj|LC368142.1| | 2081467 | g10657 | i0 | 95.038 | 101.075435203095 | 524 | 14 | 100 | 10 | 1 | 517 | 1153 | 1671 | Vannella sp. KDN1 gene for 18S ribosomal RNA, partial sequence | blastn | 52256 | 813 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Vannella | Vannella sp. KDN1 | |||
| 10166884 | 10166884 | PRJNA874604_P_NODE_85868_length_245_cov_2.226744_g85516_i0 | PRJNA874604 | 85868 | 245 | 2.226744 | 5.4555228 | Dictyostelium | 5782 | Evosea | other_Eukaryota | 193 | 1.25e-44 | NTclustered | gi|790953|dbj|D50338.1| | 44689 | g85516 | i0 | 84.896 | 61.3632653061225 | 192 | 27 | 78 | 2 | 54 | 244 | 2872 | 2682 | Dictyostelium discoideum DNA for ribosomal protein, complete cds | blastn | 15034 | 193 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum | ||
| 12330937 | 12330937 | PRJNA874604_P_NODE_39730_length_310_cov_1.299578_g39378_i0 | PRJNA874604 | 39730 | 310 | 1.299578 | 4.0286918 | Didymium bahiense | 289975 | Evosea | other_Eukaryota | 551 | 2.339999999999999e-152 | NTclustered | gi|2528966063|gb|OR214927.1| | 289975 | g39378 | i0 | 98.71 | 87.5870967741936 | 310 | 4 | 100 | 0 | 1 | 310 | 338 | 29 | Didymium bahiense voucher HFJAU14001 small subunit ribosomal RNA gene, partial sequence | blastn | 27152 | 551 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Physariida | Didymiaceae | Didymium | Didymium bahiense | ||
| 13605427 | 13605427 | PRJNA874604_P_NODE_36731_length_319_cov_1.878049_g36379_i0 | PRJNA874604 | 36731 | 319 | 1.878049 | 5.99097631 | Dictyostelium discoideum | 44689 | Evosea | other_Eukaryota | 176 | 1.7e-39 | NTclustered | gi|66826022|ref|XM_641274.1| | 352472 | g36379 | i0 | 86.709 | 1.72100313479624 | 158 | 21 | 50 | 0 | 40 | 197 | 43 | 200 | Dictyostelium discoideum AX4 S60 ribosomal protein L36a (rpl36a) mRNA, complete cds | blastn | 549 | 176 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum | ||
| 13606329 | 13606329 | PRJNA874604_P_NODE_84251_length_246_cov_0.890173_g83899_i0 | PRJNA874604 | 84251 | 246 | 0.890173 | 2.18982558 | Entamoeba histolytica | 5759 | Evosea | other_Eukaryota | 54.7 | 0.006 | NTclustered | gi|416173|emb|X70311.1| | 5759 | g83899 | i0 | 100 | 0.117886178861789 | 29 | 0 | 12 | 0 | 58 | 86 | 1791 | 1819 | E.histolytica extrachromosomal rDNA fragment | blastn | 29 | 54.7 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Entamoeba | Entamoeba histolytica | |||
| 16540982 | 16540982 | PRJNA874604_P_NODE_9933_length_540_cov_1.372591_g9585_i0 | PRJNA874604 | 9933 | 540 | 1.372591 | 7.4119914 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 460 | 7.439999999999998e-125 | NTclustered | gi|511083902|dbj|AK419160.1| | 5759 | g9585 | i0 | 83.707 | 90.9537037037037 | 491 | 76 | 91 | 4 | 6 | 494 | 517 | 29 | Entamoeba histolytica cDNA clone: Xeh-003B20, actin, complete cds, strain: HM-1:IMSS | blastn | 49115 | 462 | 0.995670995670996 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Entamoeba | Entamoeba histolytica | |||
| 17431150 | 17431150 | PRJNA874604_P_NODE_96874_length_242_cov_0.911243_g96522_i0 | PRJNA874604 | 96874 | 242 | 0.911243 | 2.20520806 | Vannella ebro | 207334 | Discosea | other_Eukaryota | 283 | 7.1e-72 | NTclustered | gi|33946344|gb|AY294151.1| | 207334 | g96522 | i0 | 90.278 | 83.8636363636364 | 216 | 21 | 89 | 0 | 27 | 242 | 16 | 231 | Vannella ebro actin mRNA, complete cds | blastn | 20295 | 283 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Vannella | Vannella ebro | |||
| 21254087 | 21254087 | PRJNA874604_P_NODE_50117_length_284_cov_1.170616_g49765_i0 | PRJNA874604 | 50117 | 284 | 1.170616 | 3.32454944 | Cochliopodium kieliense | 1512276 | Discosea | other_Eukaryota | 444 | 3.6999999999999986e-120 | NTclustered | gi|659103926|gb|KJ569726.1| | 1512276 | g49765 | i0 | 94.81 | 43.0774647887324 | 289 | 8 | 100 | 7 | 1 | 284 | 102 | 388 | Cochliopodium kieliense clone 9605 18S ribosomal RNA gene, partial sequence | blastn | 12234 | 444 | 1 | Eukaryota | Amoebozoa | Discosea | Himatismenida | Cochliopodiidae | Cochliopodium | Cochliopodium kieliense | |||
| 23804561 | 23804561 | PRJNA874604_P_NODE_68259_length_251_cov_1.730337_g67907_i0 | PRJNA874604 | 68259 | 251 | 1.730337 | 4.34314587 | Didymium megalosporum | 289980 | Evosea | other_Eukaryota | 187 | 5.98e-43 | NTclustered | gi|529177860|gb|KC814167.1| | 289980 | g67907 | i0 | 80.08 | 18.8207171314741 | 251 | 50 | 100 | 0 | 1 | 251 | 741 | 491 | Didymium megalosporum alpha-tubulin gene, partial cds | blastn | 4724 | 187 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Physariida | Didymiaceae | Didymium | Didymium megalosporum | ||
| 25078906 | 25078906 | PRJNA874604_P_NODE_8980_length_563_cov_11.808163_g8633_i0 | PRJNA874604 | 8980 | 563 | 11.808163 | 66.47995769 | Ripella sp. 805 | 1217113 | Discosea | other_Eukaryota | 881 | 0 | NTclustered | gi|399764202|gb|JQ271713.1| | 1217113 | g8633 | i0 | 95.512 | 99.0941385435169 | 557 | 16 | 98 | 9 | 11 | 563 | 1 | 552 | Ripella sp. 805 18S ribosomal RNA gene, partial sequence | blastn | 55790 | 881 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Ripella | Ripella sp. 805 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;