RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA870096" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA870096 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3400437 3400437 PRJNA870096_S_NODE_13403_length_501_cov_14.157205_g11773_i0 PRJNA870096 13403 501 14.157205 70.92759705 Brachionus rotundiformis 96890 Rotifera other_Eukaryota 335 4.339999999999999e-87   NTclustered gi|1066800230|gb|KX364937.1| 96890 g11773 i0 79.339 54.5329341317365 484 94 96 5 19 499 1552 1072 Brachionus rotundiformis chromosome II mitochondrion, complete sequence blastn 27321 335 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rotundiformis
3400947 3400947 PRJNA870096_S_NODE_48383_length_253_cov_7.961905_g46719_i0 PRJNA870096 48383 253 7.961905 20.14361965 Lecane bulla 96446 Rotifera other_Eukaryota 407 4.2500000000000005e-109   NTclustered gi|61200802|gb|AY829083.1| 96446 g46719 i0 98.69 32.2252964426877 229 3 91 0 1 229 2028 1800 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 8153 407 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
4678280 4678280 PRJNA870096_S_NODE_20684_length_398_cov_14.047887_g19026_i0 PRJNA870096 20684 398 14.047887 55.91059026 Brachionus angularis 396692 Rotifera other_Eukaryota 222 2.75e-53   NTclustered gi|1999716433|gb|MT875425.1| 396692 g19026 i0 79.747 4.28643216080402 316 57 78 6 42 352 8626 8313 Brachionus angularis chromosome I mitochondrion, complete sequence blastn 1706 222 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus angularis
7228382 7228382 PRJNA870096_S_NODE_50446_length_248_cov_1.570732_g48782_i0 PRJNA870096 50446 248 1.570732 3.89541536 Brachionus rubens 392764 Rotifera other_Eukaryota 182 2.74e-41   NTclustered gi|632795126|gb|KJ489417.1| 392764 g48782 i0 80.242 4.05241935483871 248 44 99 5 1 246 656 412 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 1005 182 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
11054264 11054264 PRJNA870096_S_NODE_8129_length_652_cov_25.981938_g6672_i0 PRJNA870096 8129 652 25.981938 169.40223576 Brachionus manjavacas 667381 Rotifera other_Eukaryota 545 2.44e-150   NTclustered gi|2006240385|gb|MW559988.1| 667381 g6672 i0 84.103 55.2622699386503 585 71 88 16 61 637 9935 10505 Brachionus manjavacas isolate DE chromosome I mitochondrion, complete sequence blastn 36031 545 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus manjavacas
12329690 12329690 PRJNA870096_S_NODE_80730_length_195_cov_1.894737_g79066_i0 PRJNA870096 80730 195 1.894737 3.69473715 Lecane bulla 96446 Rotifera other_Eukaryota 272 1.19e-68   NTclustered gi|61200802|gb|AY829083.1| 96446 g79066 i0 91.795 73.8461538461538 195 16 100 0 1 195 7 201 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 14400 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
14878298 14878298 PRJNA870096_S_NODE_59712_length_227_cov_1.565217_g58048_i0 PRJNA870096 59712 227 1.565217 3.55304259 Lecane sp. bulla5 1225232 Rotifera other_Eukaryota 195 3.17e-45   NTclustered gi|401880185|gb|JX216660.1| 1225232 g58048 i0 82.018 72.2114537444934 228 40 100 1 1 227 340 567 Lecane sp. bulla5 voucher ECOCHZ-AG0858 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial blastn 16392 195 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane sp. bulla5
23801493 23801493 PRJNA870096_S_NODE_104559_length_173_cov_1.476923_g102895_i0 PRJNA870096 104559 173 1.476923 2.55507679 Brachionus rubens 392764 Rotifera other_Eukaryota 122 1.0899999999999999e-23   NTclustered gi|1802791203|gb|MN256532.1| 392764 g102895 i0 80 0.982658959537572 170 30 97 3 1 167 5806 5974 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 170 122 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;