RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA870096" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA870096 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22526424 22526424 PRJNA870096_S_NODE_133138_length_155_cov_1.008929_g131474_i0 PRJNA870096 133138 155 1.008929 1.56383995 Suberites domuncula 55567 Porifera other_Eukaryota 176 7.25e-40   NTclustered gi|4150911|emb|Y12081.1| 55567 g131474 i0 89.362 160.845161290323 141 14 93 1 9 149 682 543 Suberites domuncula mRNA for polyubiquitin precursor blastn 24931 176 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Suberitidae Suberites Suberites domuncula
23802113 23802113 PRJNA870096_S_NODE_23899_length_369_cov_2.355828_g22236_i0 PRJNA870096 23899 369 2.355828 8.69300532 Dysidea avara 196820 Porifera other_Eukaryota 54.7 0.01   NTclustered gi|2749556513|ref|XM_066045316.1| 196820 g22236 i0 100 0.0785907859078591 29 0 8 0 251 279 1370 1342 PREDICTED: Dysidea avara uncharacterized protein (LOC136252751), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;